Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4582 ATGGCTGAAGTGAAAAAAGGTGAAGAGAATCAAGGGATTAAGCTATTTGGCACGACGATAAAATTGCATGGTGTAGAATTGAAAGAAGGTCAAAAGGAAAACGATGATCAAACTGTAGAGAAAAAGACAGAGAAGATCATACCGTGTCCAAGATGCAAGAGCATGGAAACAAAATTCTGTTATTTCAATAATTACAACGTTAATCAACCAAGACATTTTTGTAAGGGTTGTCAGAGGTATTGGACGGCTGGTGGGGCCCTTCGCAACGTGCCGGTTGGTGCCGGTCGTCGGAAGGCAAAGCCACCCGGTCATGAGGATAGTGGTTCACCGGATAGTTGTCTTTATGAATTAGCTGCTTCTGAGGAAGGTCATAAGTTTGGTGGGATAGAGCAGGGATTGGTTTTGGGCACGAGTCTTGAGAGTGACTTCCGGGAAGTTTTTTCCGGTAAGCGGCGGAGAAAGAATACAGGTTGTTATTCGTTAGCATCGTCCTTATGA 498 0.4418 MAEVKKGEENQGIKLFGTTIKLHGVELKEGQKENDDQTVEKKTEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKPPGHEDSGSPDSCLYELAASEEGHKFGGIEQGLVLGTSLESDFREVFSGKRRRKNTGCYSLASSL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4582 165 MobiDBLite consensus disorder prediction 92 111 - -
Mal4g4582 165 Pfam Dof domain, zinc finger 45 100 IPR003851 GO:0003677|GO:0006355
Mal4g4582 165 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Mal4g4582 165 PANTHER CYCLIC DOF FACTOR 2 5 158 IPR045174 GO:0003700|GO:0006355
Mal4g4582 165 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 5 158 - -
Mal4g4582 165 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4582 Mal-Chr4 124519777 124520274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4582 8 103 C2C2-Dof Transcription Factor Family AT1G29160 63.478 2.57e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal4g4582 zf-Dof 5.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4582 - - vra:106779806 196.438