Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4094 ATGGGTTTGAGTTCTAAGCAAGTTTCTAGTAGAGGTGTTGATTGGAACCATACCTTGTTGGAAGATCAAAACTTAGAACTTCCAAAAGCTACTCCTATGAAGAAACAACAACAAAGTCAGCAATTAGAGGCTGTGAATTGTCCAAGATGTGATTCTACTAATACCAAATTTTGTTACTACAACAACTATAACAAGTCTCAACCTCGCCATTTCTGCAGAGCTTGTAAGAGACATTGGACTAAAGGTGGAACTCTAAGAAATGTTCCTGTTGGTGGTGTTAGGAAGAATAAGAGAGTCAAGAAATCAACATCTCCAACCTCTATTAGCACCTCCACAAAAACTACTATTAGCACCTCCACTTCAAATGCCAATATGACATATATTCAAACTTCACAACAAAACCAGAATAAAAAAACCACACCTTCTTCCATGTATGAATCTCTTATTCATCCACCATCTTCTTTGCCACCACAGAATCTGATGAGTACCAAAGATCAATCAGAAGGTAACAGAGAAGAGTTTGGTATTGGTAATGACATGTTTCTGAGTTCATCTATGCCTTTTCCTCAAAACCAAAGCTTTATGTTCCCATTCTCAAACTCAAGCTCTTTGAGGTCATCCAATGCATATAACTATGGTGAAGAGTTTAAAATAATGGAGGAGTCAACTATTAACAACAGTGCAATGCCAAGCACCAGTGGCAGTGGCACTATTACACAGCCATGGGAGATACCTGCAACAAGTAGTGGCATGGATATGTCAAACTATTGGACTTGGGAGGATATTGATTCTTTGGTCTCAACTGATCTAAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 846 0.383 MGLSSKQVSSRGVDWNHTLLEDQNLELPKATPMKKQQQSQQLEAVNCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRVKKSTSPTSISTSTKTTISTSTSNANMTYIQTSQQNQNKKTTPSSMYESLIHPPSSLPPQNLMSTKDQSEGNREEFGIGNDMFLSSSMPFPQNQSFMFPFSNSSSLRSSNAYNYGEEFKIMEESTINNSAMPSTSGSGTITQPWEIPATSSGMDMSNYWTWEDIDSLVSTDLNVPWDDSDIKP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4094 281 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 33 242 IPR045174 GO:0003700|GO:0006355
Mal4g4094 281 MobiDBLite consensus disorder prediction 102 117 - -
Mal4g4094 281 Pfam Dof domain, zinc finger 44 97 IPR003851 GO:0003677|GO:0006355
Mal4g4094 281 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Mal4g4094 281 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Mal4g4094 281 PANTHER OS06G0284500 PROTEIN 33 242 - -
Mal4g4094 281 MobiDBLite consensus disorder prediction 130 165 - -
Mal4g4094 281 MobiDBLite consensus disorder prediction 94 117 - -
Mal4g4094 281 MobiDBLite consensus disorder prediction 130 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4094 Mal-Chr4 116895318 116896163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4094 41 112 C2C2-Dof Transcription Factor Family AT5G66940 59.722 1.91e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal4g4094 zf-Dof 2.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4094 - - gmx:100806358 355.525