Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4059 ATGGAGCAAGAAGGTAGTGGTGGTGGTGATGGTGGAAGAAGAGGTGAGGTGAATAAGCAAGTTCATGCTCATCCTCAGCCTCAAAAGTGTCCTAGGTGTGATTCATTCAACACCAAATTCTGCTATTACAACAACTATAGCCTCTCTCAGCCTCGTTTCTTCTGCAAAACATGCAGAAGATACTGGACTCAAGGAGGAACACTGAGAAATGTTCCTGTTGGTGGTGGTTGTCGGAAGGGAAAGAAAGCCAAAAATTCATCTGCAGCATCAACAAGTAATTCCTCAGGGAATTCTTTTCTGTCTCAGCCAATGCAGCCACAGTTGACTAATAATCAGTCGACTTTGGCAGCGATGGCTAAAGACACTTCTTCAGTGTTGGCTTCATTTTCCTCTGTTGTACCTTTTTATCAAGGTGGTGGTGGTGTTGGAGGAGTTGGTTATATGTCGTCTTTTGCGGCGTTTAATCAATCATTGAATCCAAACCCTCCAACACACTCTTCATCACACATTTTTGACCAGGCTTTGAATGTTGGTATTGGTTCTTCTTCAAATTTGAGCCTTTTACAAGGCTTCAATGTTGCTGCTGCTGCTGCTCTTGGAAGTTCATCTCAAGGACCAAATCGTCCATTGCCGCAACAATTCTTTCAAATGGGTGGTAATGGAGGAATGTTTACCTCAAGCTCAGATCAACAAGGTTTGAATTTGATTCCTCCATCTACCATGGTTAATGCTAGTGCTTCTGTTGCTGCTGCTGTTCCTGTTACTCAGAATGAAAATTGGCCTCATAGCTTCATCAACAATGGTAATACTAATAGGGCCTGTGATCAATCTCTTTGGAGTACTATCAGCACCACTTCAATTTCTGGTGCTAATTCTGATAGAAATGGTGGTTGTGCTGGTGGTAGTGGTAGCGGTAGCGATGGTGCTGGTGCTGGTGCTGGTGCTTCTTTTGCTCAAAATCAATGGCCTGATTTGTCACGGTTCAACCCTCCTCAATGA 999 0.4364 MEQEGSGGGDGGRRGEVNKQVHAHPQPQKCPRCDSFNTKFCYYNNYSLSQPRFFCKTCRRYWTQGGTLRNVPVGGGCRKGKKAKNSSAASTSNSSGNSFLSQPMQPQLTNNQSTLAAMAKDTSSVLASFSSVVPFYQGGGGVGGVGYMSSFAAFNQSLNPNPPTHSSSHIFDQALNVGIGSSSNLSLLQGFNVAAAAALGSSSQGPNRPLPQQFFQMGGNGGMFTSSSDQQGLNLIPPSTMVNASASVAAAVPVTQNENWPHSFINNGNTNRACDQSLWSTISTTSISGANSDRNGGCAGGSGSGSDGAGAGAGASFAQNQWPDLSRFNPPQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4059 332 MobiDBLite consensus disorder prediction 289 332 - -
Mal4g4059 332 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 17 332 - -
Mal4g4059 332 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 332 IPR045174 GO:0003700|GO:0006355
Mal4g4059 332 MobiDBLite consensus disorder prediction 84 106 - -
Mal4g4059 332 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Mal4g4059 332 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Mal4g4059 332 Pfam Dof domain, zinc finger 27 82 IPR003851 GO:0003677|GO:0006355
Mal4g4059 332 MobiDBLite consensus disorder prediction 73 106 - -
Mal4g4059 332 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4059 Mal-Chr4 116323628 116324626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4059 25 90 C2C2-Dof Transcription Factor Family AT5G60200 72.857 5.24e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal4g4059 zf-Dof 2.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4059 - - mtr:MTR_2g014060 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4059 4 116323628 116324626 Mal4g4059 4 116323628 116324626 ECH