Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g4058 ATGTTATCTAACTGTGAGAAAATGGTTGTCATCCCTCCGACTACTAACCAATGGCCACAGAATCAAATAGATGATGGTAAGATAATGGAAAAACAAGGTCAAGAGCTTCTGCAGCAGCAGCAACAAGTCCTCAAGTGTCCACGTTGTGACTCATCAAACACAAAATTCTGTTACTACAATAACTACAGTTTGTCACAACCAAGACACTTCTGCAAAGCTTGCAAACGTTATTGGACAAGAGGCGGTACTCTTAGGAATGTTCCTGTTGGTGGTGGCTACAGAAGAAACAACTCAAACAAACGTAGTAGCAATACTACTCTCATCAAAAGACCCTCCACCATTGATACTACTAATTCTTCTTCTCCTTCTTCAGCTCCTAGTTCAACCTTAAATCATAATCTTAGTCCTATGTTTTATGGTTTATCAAGTAGTAACCCTTGTGATGAGAATCTTCCATTCTCAAGGTTCAATATTTCTAGACTCTCAACAAGTTCAGGTTATGATTTTCAGCCTCAGATGAATACTATTGGATTAGGCTTTTCATCCGGGTTTATGTCGAGTGAAGTCAATGATCATAATCATAATGGTTATACAAATGGGCTCAATACTTCAAATAATAACACTCTAGTTTCAAGATATGATTCAATCTTTAGTTCTTCTTCTGCACCAAGTAATGAATCAGTTATGCCTTCTCTGTTGAGTTCTGCTTTGCTGCAACATAAATTCATGAATGATGGTTTGAAATATGGTCAAGATGCAGGTAGCAACATTTTTCAGGGTTTAGAATTTAACAACTTGGGAAATGGAAGTGAGAAAGGGTTGAAGAAAGATGAAGGACATATGGAACATGTGGGTTTGTATGATCCTTCTTCACTTTACTGGAATACAGCATCATCATCAGCTATTGGTGTTTGGAATGATCAAGGTTCTAATATTGGTTCATCAGTCACTTCTCTGATCTAG 963 0.3749 MLSNCEKMVVIPPTTNQWPQNQIDDGKIMEKQGQELLQQQQQVLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGYRRNNSNKRSSNTTLIKRPSTIDTTNSSSPSSAPSSTLNHNLSPMFYGLSSSNPCDENLPFSRFNISRLSTSSGYDFQPQMNTIGLGFSSGFMSSEVNDHNHNGYTNGLNTSNNNTLVSRYDSIFSSSSAPSNESVMPSLLSSALLQHKFMNDGLKYGQDAGSNIFQGLEFNNLGNGSEKGLKKDEGHMEHVGLYDPSSLYWNTASSSAIGVWNDQGSNIGSSVTSLI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g4058 320 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Mal4g4058 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 2 263 - -
Mal4g4058 320 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Mal4g4058 320 MobiDBLite consensus disorder prediction 92 129 - -
Mal4g4058 320 MobiDBLite consensus disorder prediction 88 129 - -
Mal4g4058 320 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Mal4g4058 320 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 263 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g4058 Mal-Chr4 116302735 116303926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g4058 44 320 C2C2-Dof Transcription Factor Family AT1G28310 42.345 5.09e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal4g4058 zf-Dof 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g4058 - - mtr:MTR_2g014170 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g4058 4 116302735 116303926 Mal4g4058 4 116302735 116303926 ECH