Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2095 ATGATGCAAGGAAGTGGAGAATTAACAGTTCCTCCAGGGTTCAGGTTCCACCCAACTGATGAAGAGCTTCTTTACTATTACCTGAGAAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTTATCAGAGAAGTTGATCTCAATAGACTTGAGCCATGGGACCTCAAAGATAAGTGTAGGATTGGATCAGGGCCACAAAATGAGTGGTATTTCTTCAGCCACAAGGACAAGAAATATCCAACAGGAACAAGAACAAATAGAGCAACAACAGCTGGGTTTTGGAAAGCAACTGGAAGAGACAAAGCCATATATCACACCAATTCCAAAAGGATTGGAATGAGGAAAACCTTAGTTTTCTACACTGGACGTGCTCCTCATGGCCACAAAACTGATTGGATCATGCATGAGTATCGTCTTGATGATGATGATAATGCAGAAGTTCAGGAAGATGGATGGGTAGTATGCAGGGTATTCAAAAAGAAAAACACAAACAGAGGCTACCAACAAGAAATTGAAGAAGAAGATCACATGATTAACCACATGAGATCAACAAATGGTCCAACCCATTTTCTAGAACAAAAACATCAACATCACATGCAACAACTAGGACTATATGATTACAACAATAACAACAACACCTTTGATGGTACAATTCACCTACCACAATTATTCAGTCCAGAATCAGCTATAGCACCACCACCAACTTCCTTCCATAATTCACCCATGGACATTCTTGAATGCTCTCAAAATTTGTTGAGGCTCACAACAACAAATACTAGCTCTGGACTTAATCTCATGCAGCAACAACAGGGAGAAAGATTGATCAATGGTAGTGATTGGTCATTCTTGGATAAACTACTTGCATCTCACAATGGAATGGATCTTAATCTAAGAAACAAATTATGTAACACTCCAAATAATCAGCACCAGGCTGCACCTGCTGCTGTTGGATCAACTTCTTCAGCTCAGAAATTTCCATTTCACTACCTTGGTTGTGAGACTCATGATATTATGAAATTTTCAAAGTGA 1029 0.3907 MMQGSGELTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNRLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGHKTDWIMHEYRLDDDDNAEVQEDGWVVCRVFKKKNTNRGYQQEIEEEDHMINHMRSTNGPTHFLEQKHQHHMQQLGLYDYNNNNNTFDGTIHLPQLFSPESAIAPPPTSFHNSPMDILECSQNLLRLTTTNTSSGLNLMQQQQGERLINGSDWSFLDKLLASHNGMDLNLRNKLCNTPNNQHQAAPAAVGSTSSAQKFPFHYLGCETHDIMKFSK* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2095 342 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 325 - -
Mal4g2095 342 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Mal4g2095 342 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Mal4g2095 342 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 325 - -
Mal4g2095 342 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Mal4g2095 342 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2095 Mal-Chr4 47167824 47169787 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g2095 NAM 7.3e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2095 4 47167824 47169787 Mal4g2095 4 47167824 47169787 ECH