Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2030 ATGGCAGCAGTGAAGCTAGGTGGCACCATGAGCAACGCACTCCGATCATCAAAGCTTCTTCTTTATCGCTCTTCCTATTCTCATCTTCTCTCCGCTAACTTCCTCATGCAAATTCCCCTAACTGGCAAGATGAGCACGGACGCGCAAAGTGTCGCCTCCCAGCTTAACAGTTCTGGGCTGTTGAGGACTCAGGGACTCATTGGAGGGAAATGGCAGGATGCTTATGATGGAAAAACCATAAAGGTTTATAATCCAGCAACTGGTGAATCTATAGCAGATGTAGCATGCATGGGTGGAAGAGAAACAAATGATGCAATTTCCTCTGCTTTTGATGCATTTAGATCATGGAGCAAAATCACTGCTGCAGAGCGTAGTAAATATCTGAGGAAATGGTATGATTTGCTAATGGCACATAAGGAAGAGTTAGCACAACTTATTACCTTGGAGCAAGGAAAGCCTCTTAAAGAGTCTATGGGTGAGATAAGTTATGGTGCTGGCTTTATTGAGTTTGCATCAGAGGAGGCAAAACGTATATATGGGGATATAATTCCTGCACCTCTATCTGATCGAAGGTTATTTGTTTTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAGGTTGGTCCAGCCCTTGCATGTGGATGTACAGTGGTCATAAAGCCCTCTGAACTTACGCCTCTGACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCTGCGGGTGTTGTGAATGTGGTTATGGGAAATGCTCCTGATATTGGAGACGCTTTAGTCGCAAGTCCACAGGTAAGGAAGATTACATTCACTGGCTCGACGGCTGTTGGAAAGAAATTGATGGCAGGTTCTGCTGAGACAGTTAAAAAGGTATCTCTGGAACTTGGTGGCAACGCGCCATGCATAATTTTTGATGATGCTGACCTGGATGTTGCAGTGAAAGGAACACTTGCAGCAAAGTTCCGTAATAGCGGACAAACATGTGTTTGTGCAAATAGAATTCTTGTGCAAGAAGGTATATATGACAAGTTTGCCAATGCATTGCTTGATGCTGTTCAGAGTATGAAAGTTGGAGATGGTTTTAGTGAAGGTGTAGCTCAGGGTCCTCTGATCAATGAAGCTGCTGTTAAAAAGATTGATTCCTTGATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTCTTGGGGGTAAAAGACATAGCCTTGGATCAACTTTTTATGAACCAACAGTCATAACTGATGTCGACAACGAGATGGATATATCAAGACAGGAAGCATTTGGACCTGTCGCACCCCTTTTGAGATTCAAAACTGAAGAAGATGCTATCAGAATTGCTAACGACACTAATGCAGGCTTGGGTTCATACGTATTTACAAACAGTATCCAACGATCATGGCGTGTGGCTGAGGCTCTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACAGAGGTGGCTCCATTTGGTGGAGTTAAACAGTCTGGCCTTGGAAGAGAAGGTTCCAAATATGGGATGGATGAATATTTGGAGATCAAGTATGTCTGTTTGGGAAACATGAACAAAGATTGA 1617 0.4335 MAAVKLGGTMSNALRSSKLLLYRSSYSHLLSANFLMQIPLTGKMSTDAQSVASQLNSSGLLRTQGLIGGKWQDAYDGKTIKVYNPATGESIADVACMGGRETNDAISSAFDAFRSWSKITAAERSKYLRKWYDLLMAHKEELAQLITLEQGKPLKESMGEISYGAGFIEFASEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALVASPQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIIFDDADLDVAVKGTLAAKFRNSGQTCVCANRILVQEGIYDKFANALLDAVQSMKVGDGFSEGVAQGPLINEAAVKKIDSLIHDATSKGAKVILGGKRHSLGSTFYEPTVITDVDNEMDISRQEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKD* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2030 538 SUPERFAMILY ALDH-like 59 536 IPR016161 GO:0016491
Mal4g2030 538 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 535 - -
Mal4g2030 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
Mal4g2030 538 Pfam Aldehyde dehydrogenase family 71 530 IPR015590 GO:0016491
Mal4g2030 538 CDD ALDH_F5_SSADH_GabD 82 532 - -
Mal4g2030 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 524 IPR016162 GO:0016491
Mal4g2030 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Mal4g2030 538 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 535 - -
Mal4g2030 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Mal4g2030 538 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 82 528 IPR010102 GO:0009013|GO:0009450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2030 Mal-Chr4 43465464 43478688 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2030 4 43465464 43478688 Mal4g2030 4 43465464 43478688 ECH