Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2020 ATGGCTGAGATTGGTGGCATACGAGGTGAACCTCTTCTTGATGAAGAAGTTTCAAACGGTTCATGGAGACTCAATGTCAAAGAGTTTCATATACCATCCCAGAATGTTGTTGATCATCAAAACAAATCTTTGTTCAGTTTCAATGGTCTTCTTCGTAAGCCTAGGAAGCAACGCAAAGTGGCTGAGTATTACAAGAAACAGGAGAGACTCCTCGAAGGATTTAACGAAATGGAAACTATGCATGAAACTGGTTTTTTCCCAGGAGGTCTCACTGAGGATGAAATGAAGCAACTTGCAAAGAGTGAGAGGATGGCAATTCATGTGTCAAATGTATGTAACTTTTTCCTGTTTGCAGCAAAGGTTTTCGCGTCTATTGAGAGCAGATCATTAGCAGTCATTGCATCAACACTAGATTCTCTTTTGGATCTCTTGTCTGGTTTCATATTGTGGTTTACTTCCAATGCCATGAGAAAGCCAAACCGATTTCACTATCCGATTGGAAAGAAACGCATGCAACCAGTGGGTATCATTGTTTTTGCATCCGTGATGGCAACCTTGGGCTTGCAGATTTTGATCGAGTCCGGTCGGCAAATTATTGCAAAGGCTAAGCCAGAAGTCGATCCAATAAAGGTGAATTGGATGATCGGGATTATGGTATTCGTAACTATAGTGAAGTTCATTCTTATGGTCTATTGTCGAAGATTTAAAAATGAAATTGTCAGAGCATATGCACAAGATCATTTTTTCGATGTCATTACTAATTCCGTCGGATTAGCCGCTGCTATTCTAGCTGTCAAGTTCTTCTGGTGGATGGATCCAACAGGAGCTATTGTTATTGCACTATATACAATTAACACATGGACAAAGACAGTGATTGAGAATGTTTGGTCACTCATTGGAAGAACAGCACCACCTGAATTCTTGGCAAAGTTAACTTACCTTATATGGAACCACCATGAACAAATCAAGCACATAGATACAGTTAGAGCATACACATTTGGTGCACATTACTTTGTGGAAGTTGATATTGTTTTGCCAGAAGACATGTTCCTCAACCAAGCACACAACATTGGTGAAACACTTCAAGAGAAGCTAGAACAACTTCCAGAAGTTGAAAGAGCTTTTGTTCACATTGATTTTGAGTTCACTCATAGACCTGAGCATAAGACATCTGTATGA 1179 0.3978 MAEIGGIRGEPLLDEEVSNGSWRLNVKEFHIPSQNVVDHQNKSLFSFNGLLRKPRKQRKVAEYYKKQERLLEGFNEMETMHETGFFPGGLTEDEMKQLAKSERMAIHVSNVCNFFLFAAKVFASIESRSLAVIASTLDSLLDLLSGFILWFTSNAMRKPNRFHYPIGKKRMQPVGIIVFASVMATLGLQILIESGRQIIAKAKPEVDPIKVNWMIGIMVFVTIVKFILMVYCRRFKNEIVRAYAQDHFFDVITNSVGLAAAILAVKFFWWMDPTGAIVIALYTINTWTKTVIENVWSLIGRTAPPEFLAKLTYLIWNHHEQIKHIDTVRAYTFGAHYFVEVDIVLPEDMFLNQAHNIGETLQEKLEQLPEVERAFVHIDFEFTHRPEHKTSV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2020 392 Gene3D Cation efflux protein transmembrane domain 103 298 IPR027469 -
Mal4g2020 392 PANTHER METAL TOLERANCE PROTEIN 9 16 391 - -
Mal4g2020 392 Pfam Dimerisation domain of Zinc Transporter 304 379 IPR027470 -
Mal4g2020 392 SUPERFAMILY Cation efflux protein transmembrane domain-like 101 300 IPR027469 -
Mal4g2020 392 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 16 391 - -
Mal4g2020 392 Gene3D Cation efflux protein, cytoplasmic domain 302 380 IPR036837 -
Mal4g2020 392 Pfam Cation efflux family 108 298 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Mal4g2020 392 TIGRFAM CDF: cation diffusion facilitator family transporter 105 379 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Mal4g2020 392 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 303 379 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2020 Mal-Chr4 43196816 43200847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2020 4 43196816 43200847 Mal4g2020 4 43196816 43200847 ECH
Mal4g2020 4 43196816 43200847 Mal5g2127 5 50254993 50259381 PCT