Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1903 ATGCCCCTATCTCCTTCTTTCATGGCTTCTTCCACAATCCCTCATCACTTCTATTCAAACTACACTTCTGATTTCACCACACAACAAGGTTTGTCTTCATCAATTATGGACAATAATACTATGATGTGGGGTTGTCAAGAAAATATAATGCCTGTTTTTGATAATTATGGAGCATTTGATCAAATTGTGTCACTTGATTGTGATGCTTCTTCTGCTTCTTGGATTCCAAATTTGGTTGAGCAACAAGATTTTGCTGTTCCAACTTTATTATCAGATTGTAAAATGGGATTTTATGGTGGAGGGTTTCAGAATTTCAATGGTAGATATAATAATCAACCACATATTGGTCATGAGTTTGTTGAAGATGTTAAACCACCTACATCTTATCCTAATGTTGCAAGAGAAAATTGGGGGATTCAAGGTAATCAAATAGCAGCAGTTGAAGAGCCAAACATAAAAGTAGGAAGGTACTCAGAAGAAGAAAGGAAAGAAAGAATTCTCCGATATTTGAAGAAAAGAAATCAAAGGAATTTCAACAAAACCATTAAGTATGCATGTCGGAAAACTTTAGCTGATAGAAGAGTGAGAGTGAGGGGAAGGTTTGCAAGAAACAATGAGACATGTGAAGAAGATCACATGGCCACAAAAAAGCTTGAGAATCATCATGATCACATCAATGAAGACTTTTATGGTGCTGATTCATTCCAGTTCCAGTTAAAGAATGAGGAAGAGGACTGGCTTCAAGAAGCTATGGCAAGTTTGGTCTATTTATCTCATTCATCACCGGAAGATATGTGA 798 0.3634 MPLSPSFMASSTIPHHFYSNYTSDFTTQQGLSSSIMDNNTMMWGCQENIMPVFDNYGAFDQIVSLDCDASSASWIPNLVEQQDFAVPTLLSDCKMGFYGGGFQNFNGRYNNQPHIGHEFVEDVKPPTSYPNVARENWGIQGNQIAAVEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNETCEEDHMATKKLENHHDHINEDFYGADSFQFQLKNEEEDWLQEAMASLVYLSHSSPEDM* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1903 265 PANTHER ACTIVATOR OF SPOMIN::LUC2 8 260 - -
Mal4g1903 265 ProSiteProfiles CCT domain profile. 162 204 IPR010402 GO:0005515
Mal4g1903 265 Pfam CCT motif 162 204 IPR010402 GO:0005515
Mal4g1903 265 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1903 Mal-Chr4 36487503 36489422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1903 51 213 C2C2-CO-like Transcription Factor Family AT5G24930 30.952 1.48e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal4g1903 CCT 8.1e-17 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1903 4 36487503 36489422 Mal4g1903 4 36487503 36489422 ECH