Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1900 ATGAAGGATGGTGGTAGAAAACAAGGTACAATGTCACCATGTGCTGCATGCAAGCTTCTTAGAAGAAGATGTGCACAAGATTGTGTGTTTGCTCCATATTTCCCAGCTGATGAACCTCACAAGTTTGGTAGTGTCCACAAAGTTTTTGGGGCTAGCAATGTGAACAAAATGTTACAGGAATTACCAGAGCATCAACGAAGTGATGCAGTTAGTTCAATGGTATATGAAGCAAATGCAAGGGTAAGGGACCCTGTATATGGATGTGTAGGAGCTATATCCTCTCTACAGCAACAAGTTGATGCACTTCAAACCCAATTAGCACAAGCACAAGCTGAAGTTGTGCATATGAAAATGCACCAAATCTCATCACCAGATCAACAACACCAATCATCTTCATATCCTAATCCTACAGCCTCCAATTCATCACCACCCTCGGATAATATGTACCAATCAAGCAGGTTCTTTTCTTCACAAACCAACAATATGGGGCAATCCTTGTGGTCATACTAG 510 0.4157 MKDGGRKQGTMSPCAACKLLRRRCAQDCVFAPYFPADEPHKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAQAQAEVVHMKMHQISSPDQQHQSSSYPNPTASNSSPPSDNMYQSSRFFSSQTNNMGQSLWSY* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1900 169 Coils Coil 92 119 - -
Mal4g1900 169 MobiDBLite consensus disorder prediction 117 157 - -
Mal4g1900 169 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Mal4g1900 169 MobiDBLite consensus disorder prediction 120 157 - -
Mal4g1900 169 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Mal4g1900 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 164 - -
Mal4g1900 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1900 Mal-Chr4 36379703 36385030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1900 1 168 AS2 family AT1G31320 61.667 5.92e-67 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal4g1900 LOB 3.4e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1900 4 36379703 36385030 Mal4g1900 4 36379703 36385030 ECH