Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1866 ATGGCGAAACCTGGTCGAGCTCGTCGCTCACCACCGTCAGGTTCCGTCTCCGGATCTTCCTCTCTCTCCTCCTCTTCACGTTCCTCATCCCGCTCTCGCTCTCGCTCTCGTTCCAGATCCTTCTCTTCCTCTTCTCGTTCTCCCTCCCGCAGTTCCAAGAGCCGCAGCCGTAGTCCTCCTCCTCAGAGACGCAAAAGTTCTGCTGAACCAGCTAGGCGAGGTCGATCTCCTCCTCTTCCTCCCCCTCCACAGTCTAAGAGACCTTCTCCTCCCCCAAGGAAACCTTCTCCCGTGCGCGAGTCTCTTGTTCTGCACGTCGAAAAACTCAGCAGGAATGTTAATGAAGGCCATTTGAAAGAAATTTTCAGTAATTTTGGTGAGGTTGTAAGTGTGGAGTTGGTGATGGATAGAGCTGTTAATCTTCCAAAAGGATATGGATATGTGCATTTCAAGACAAGAGGGGAAGCTGAAAAGGCATTATTGTACATGGATGGTGCCCAAATAGATGGCAATGTCGTTAAGGCAAGATTTACTCTACCTCCAAGACAGAAAGCTTCACCTCCAAAACCTTTTGCTGTTGCTCCGAAGAGAGATCCACCTAGGACTGACAATGCTGGTCCAGAAGTTGAAAAAGATGGGCCAAAGCGTCCAAGAGAATCTTCTCCTCGGAGAAAACCTCCTCCCTCACCACGAAGAAGATCTCCTGTTCCTCGAAGAGCTGGATCTCCCAGACGACCAGATTCTCCTCGCCGCCGTGCAGATTCTCCTGTTCGTCGTCGATTAGACTCTCCTTATCGTCGCGGAGCTGGAGACACACCTCCTAGGAGGAGACCTGTGTCTCCCGGAAGAGGTCGTTCTCCGTCTCCACCACCAAGGCGCCTTAGATCCCCTGCAAGGGTCTCACCTCGAAGGATGCGTGGAAGCCCAGGCCCAGGTCGGAGACGTTCTCCTCCTCCACCTCCAAGACGCCGATCACCTCCTAGACGAGCTCGTAGTCCTCCTAGAAGATCTCCAGTTGGTCGTAGGCGTAGTCGCTCTCCAATACGTAGATCTGCACGCTCACGCTCAAGATCATTCTCACCTCGCAGAGGTCGACCACCTGTGAGACGGGGAAGGTCATCATCTTACTCTGATTCACCAAGTCCTCGCAAGGTATCCCGGAGATCAAAGAGTCGCAGTCCAAGAAGGCCTTTGAAAGGAAGAGCCAGTAGCAACAGTAGCAGCAGCAGTTCACCACCCCCAGCTCGCAAACCATAG 1257 0.5298 MAKPGRARRSPPSGSVSGSSSLSSSSRSSSRSRSRSRSRSFSSSSRSPSRSSKSRSRSPPPQRRKSSAEPARRGRSPPLPPPPQSKRPSPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELVMDRAVNLPKGYGYVHFKTRGEAEKALLYMDGAQIDGNVVKARFTLPPRQKASPPKPFAVAPKRDPPRTDNAGPEVEKDGPKRPRESSPRRKPPPSPRRRSPVPRRAGSPRRPDSPRRRADSPVRRRLDSPYRRGAGDTPPRRRPVSPGRGRSPSPPPRRLRSPARVSPRRMRGSPGPGRRRSPPPPPRRRSPPRRARSPPRRSPVGRRRSRSPIRRSARSRSRSFSPRRGRPPVRRGRSSSYSDSPSPRKVSRRSKSRSPRRPLKGRASSNSSSSSSPPPARKP* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1866 418 PANTHER RIBONUCLEIC ACID BINDING PROTEIN S1 1 398 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 317 369 - -
Mal4g1866 418 PANTHER BNAA09G56240D PROTEIN 1 398 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 74 97 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 178 418 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 201 226 - -
Mal4g1866 418 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 102 180 IPR000504 GO:0003723
Mal4g1866 418 SMART rrm1_1 103 176 IPR000504 GO:0003723
Mal4g1866 418 CDD RRM_RNPS1 104 176 IPR034201 -
Mal4g1866 418 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 174 IPR000504 GO:0003723
Mal4g1866 418 SUPERFAMILY RNA-binding domain, RBD 86 189 IPR035979 GO:0003676
Mal4g1866 418 MobiDBLite consensus disorder prediction 1 100 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 12 56 - -
Mal4g1866 418 Gene3D - 17 187 IPR012677 -
Mal4g1866 418 MobiDBLite consensus disorder prediction 398 418 - -
Mal4g1866 418 MobiDBLite consensus disorder prediction 243 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1866 Mal-Chr4 35583600 35589725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1866 104 177 Eukaryotic Initiation Factors Gene Family AT2G23350 32.432 3.21e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1866 4 35583600 35589725 Mal4g1866 4 35583600 35589725 ECH