Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1844 ATGAGCAACATAAGCATGGTTGAGGCAAAGCTACCACCAGGGTTCAGATTTCATCCTAGAGATGAAGAACTTGTGTGTGATTACTTGATGAAGAAGGTGACACATAGTGATTCCTTTCTCATGATTGATGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCTGAATCAGCATGTGTGGGAGGGAAAGAGTGGTATTTCTATACACAAAGAGACCGTAAATATGCAACAGGGTTACGCACAAATCGTGCAACTGCATCAGGCTATTGGAAAGCTACAGGAAAGGACAGAGCTATCCTTCGCAAGGGCACTCTTGTTGGGATGAGAAAGACTTTAGTTTTCTATCAAGGAAGGGCACCTAAAGGGAGAAAAACTGAATGGGTTATGCATGAGTTTCGTATTGAAGGTCCTCATGGTCCTCCTAAAATTTCTTCTTCTAAGGAAGATTGGGTTTTGTGTAGGGTGTTCTATAAAAACAGAGAAGTTGCTACAAAACCTCCTAGCATGGGTAGTTGCTATGATGATACAGGCTCTTCATCACTTCCAGCATTAATGGATTCTTACATAAGTTTTGATCAAGCTCAATTCCATACAGATGAATATGAGCAAGTGCCCTGCTTCTCCATTTTTTCTCAAAACCAAACCAATCCAATCTTCAACCATACAACAACCAATTTGGAACCAAAATTACCTGAAGTCAACAATAACAATGCACCTACATTTGGAGGAGCACCTTATAGCTTAGACCCTTTATCATGTGATAGAAAAGTGTTAAAAGCTGTTTTGAGTCAACTCTCAAAAATGGAAAGAAACCCTCTTAATAATAATACTAATCAAAGTCTTAAAGGGTCATCACCAAGCTTAGGTGAAGGAAGTTCTGAGAGTTACTTATCTGAAGTGGGTATGCCCCACATGTGGAACAATTACTAA 930 0.3968 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHSDSFLMIDVDLNKCEPWDIPESACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRAILRKGTLVGMRKTLVFYQGRAPKGRKTEWVMHEFRIEGPHGPPKISSSKEDWVLCRVFYKNREVATKPPSMGSCYDDTGSSSLPALMDSYISFDQAQFHTDEYEQVPCFSIFSQNQTNPIFNHTTTNLEPKLPEVNNNNAPTFGGAPYSLDPLSCDRKVLKAVLSQLSKMERNPLNNNTNQSLKGSSPSLGEGSSESYLSEVGMPHMWNNY* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1844 309 Pfam No apical meristem (NAM) protein 12 134 IPR003441 GO:0003677|GO:0006355
Mal4g1844 309 MobiDBLite consensus disorder prediction 269 296 - -
Mal4g1844 309 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 305 - -
Mal4g1844 309 PANTHER BNAC05G40360D PROTEIN 3 305 - -
Mal4g1844 309 MobiDBLite consensus disorder prediction 269 294 - -
Mal4g1844 309 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Mal4g1844 309 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Mal4g1844 309 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1844 Mal-Chr4 34934724 34940250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1844 2 307 NAC Transcription Factor Family AT1G56010 60.308 3.93e-128 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal4g1844 NAM 2.1e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1844 4 34934724 34940250 Mal4g1844 4 34934724 34940250 ECH