Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1821 ATGTTTATATTAGTTGGGAACGTGCAAGGAACATCAATGAGTTCTCATGTTTCACCAGTGAGTTTAGGTAGTTTCATTGGTGTGAGTAGGTCACATTCTGTTGTTACAAGAGTTTCTCTTTCTAGTTCTAGAAGGAATTATATAGAGAAAAAAAGATGGCATTGTGTTTCTTTGTCTGTTTGTAGATATTCAGTTACCACTACTGATTTTGTTGCTGACCAAGGAAATTCCGTTTCATCGCTTGATTCTTCTAACAATGATGATAGTAATAGTGGTGGTGTTGGTGGTAGTTTTGTACTTAAACCTCCTCCTAAGCCTGTGTTGAAGTCTAATAATGATTCGATTTTAGGATCGAGTTCGGGGTTAGGGGGTTCGACGAGGAATGGTGAGGGTGATGATGGTGTGGATGAGAGAGGTAAGGTGATTGAATCACTTGGGGAGGTTTTGGAGAAGGCGGAAAAGTTGGAGAATTCTAAGTTGGGGGGTGAGAGAAGTAATGGTTCGGTAAATAAACCGGCAAGACCGGAGATGAATGATAAACCTAAGGAGGATAAACCGGTGAATTCATTACAAAAACATAAGGCGAAGACGTTGAAGAGTATTTGGCGTAAAGGGGATTCGGTTGCGACTGTGCAGAAGGTTGTGAAGGAAGTACCAAAGCCTAGTATCAAGAGAAGTGAAGTGGGGGAATCTCAAGTAGGGGGAGGGGAGAAGGTAACGTCTCAGTCGAGTGATCCTCAGCCTCTTTCGAGACCTCAACCGATGTTACAATCTAGGCCATCTATAGCCCCGCCACCTCCGCCACCTATTAAAAAACCTGTTATCTTGAAGGATGATAAAGGGCAAGGTGAAACACCTGTTAAGCCTAAGGAAAAGAAGGCGCCTGTCTTGATTGATAAGTTTGCTTCAAAGAAACCGGAAGTTGACCCCTCGATTGCCCGAGTGGTTCTAGCTCCTACGAAACCAGGGAAGGCCCCTCCTCAAGGAAGGTATAAAGATGATTACCGGAAGAAAGGTGCTTCGTCTGGGGAAGGACCAAGAAGACGAATGGTGGTGAATGATGATGGTATTCCTGACGAGGATACTTCGGGACTCAATGTCTCTATTCCCGGTGCTGCAAGAAAAGGAAGGAAATGGAGTAAAGCAAGTCGTAAGGCGGTACGACTTCAGGCTGCCAGGGATGCTGCTCCTGTAAAAGTTGAAATTCTAGAGGTCAGTGATAATGGTATGCTGGTGGAGGAGTTGGCATACAATTTGGCAATTACTGAAGGTGAAATCCTTGGCTCTCTGTACTCCAAGGGAGTTAAGCCAGATGGGGTGCAAACTCTAGACAAGGATATGGTGAAAATGATTTGTAAAGATTATGATGTGGAAGTCATAGATGCCGATCCTTTCAGAGTTGAAGGATTAGTGAAGAGAAGGGAAATTCTCGAAGAAGAAGACCTCGACAAACTCAAAGACAGGCCTCCTGTTATTACTATCATGGGCCATGTTGACCACGGCAAGACAACTCTTTTGGATCATATACGGGAGACCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAGGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGAAAAACGTTGCCGTGTGTTTTTCTCGACACTCCTGGGCACGAGGCATTTGGGGCAATGAGAGCCCGTGGAGCAAGCGTAACAGACATTGCTATTGTTGTTGTGGCTGCTGATGATGGTATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCCAAAGCAGCAGGAGTACCCATTATAATTGCTATAAACAAGATAGATAAAGATGGAGCAAATCCAGACCGAGTTATGCAAGAGCTTTCTTCAATTGGTTTGATGCCAGAAGACTGGGGTGGTGACACCCCAATGGTTCAGATAAGTGCTCTTCAAGGGAAGAATGTAGACGATCTTTTGGAAACTATTATGCTTGTTGCTGAGTTGCAAGAACTGAAAGCTAATCCTGATAGAAGTGCGAAGGGCACGGTCATTGAGGCAGGCATGGATAAATCAAAAGGACCATTTGCCACATTTATTGTGCAGAATGGGTCACTTAGAAGGGGAGATATTGTAGTTTGTGGAGGAGCTTTCGGAAAGGTGCGGGCTTTATTCGATGATGGTGGAAAGCGTGTCGATGTAGCTACACCTTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAGTTGCTGGTGATGTATTTGAGGTTGTTGAATCCCTTGATACTGCACGTGAAAAGGCAGAGTCCCGTGTTATGTCATTGCGAGATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGGTCACCCTTTCTTCCTTAGCTTCTGCAGTTTCCTCAGGAAAGCTTTCTGGACTAGACTTGCACCAACTGAATATTATTTTGAAGGTTGATCTTCAGGGATCCATTGAAGCCGTCAAACAAGCCCTGCAGGTGCTACCACAAGATAATGTCACGCTGAAGTTTTTGATGGAGACAACAGGTGATGTAAGCACAAGTGATGTTGACCTTGCGGCTGCAAGCAAAGCGATTATTTTTGGATTTAATGTCAAAGCACCAGGCTCTGTGAAAAGCTATGCAGATAATAAACTTGTTGAGATAAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAAAGCAATGGAAGGGCTCCTAGATTCTGTTGAGGAACAAGTACCAATTGGCTCAGCAGAAATACGGGCCGTATTCAGAAGTGGTAGTGGTCGTGTTGCCGGATGTATGGTTACAGAGGGAAAGGTTACAAAAGGCTGTGGCATTCGAGTCATGCGGAAGGGAAAAATAGTTCATGTTGGGATTCTTGATTCTTTGAGACGGGTGAAAGAGATTGTTAAAGAGGTAAATGCTGGTCTTGAGTGTGGACTTGCGTTAGAAGACTATGATGATTGGGAAGAGGGCGACATTCTTGAAGCCTTCAACACAGTTGAGAAGAGAAGAACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCTGTGGAAGGAGTAGGATCTTAA 3045 0.4414 MFILVGNVQGTSMSSHVSPVSLGSFIGVSRSHSVVTRVSLSSSRRNYIEKKRWHCVSLSVCRYSVTTTDFVADQGNSVSSLDSSNNDDSNSGGVGGSFVLKPPPKPVLKSNNDSILGSSSGLGGSTRNGEGDDGVDERGKVIESLGEVLEKAEKLENSKLGGERSNGSVNKPARPEMNDKPKEDKPVNSLQKHKAKTLKSIWRKGDSVATVQKVVKEVPKPSIKRSEVGESQVGGGEKVTSQSSDPQPLSRPQPMLQSRPSIAPPPPPPIKKPVILKDDKGQGETPVKPKEKKAPVLIDKFASKKPEVDPSIARVVLAPTKPGKAPPQGRYKDDYRKKGASSGEGPRRRMVVNDDGIPDEDTSGLNVSIPGAARKGRKWSKASRKAVRLQAARDAAPVKVEILEVSDNGMLVEELAYNLAITEGEILGSLYSKGVKPDGVQTLDKDMVKMICKDYDVEVIDADPFRVEGLVKRREILEEEDLDKLKDRPPVITIMGHVDHGKTTLLDHIRETKVAASEAGGITQGIGAYKVQVPVDGKTLPCVFLDTPGHEAFGAMRARGASVTDIAIVVVAADDGIRPQTNEAIAHAKAAGVPIIIAINKIDKDGANPDRVMQELSSIGLMPEDWGGDTPMVQISALQGKNVDDLLETIMLVAELQELKANPDRSAKGTVIEAGMDKSKGPFATFIVQNGSLRRGDIVVCGGAFGKVRALFDDGGKRVDVATPSIPVQVIGLNNVPVAGDVFEVVESLDTAREKAESRVMSLRDERISAKAGDGKVTLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAVKQALQVLPQDNVTLKFLMETTGDVSTSDVDLAAASKAIIFGFNVKAPGSVKSYADNKLVEIRLYRVIYELIDDVRKAMEGLLDSVEEQVPIGSAEIRAVFRSGSGRVAGCMVTEGKVTKGCGIRVMRKGKIVHVGILDSLRRVKEIVKEVNAGLECGLALEDYDDWEEGDILEAFNTVEKRRTLEEASASMAAAVEGVGS* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1821 1014 Pfam Translation-initiation factor 2 795 888 IPR023115 -
Mal4g1821 1014 Gene3D Translation factors 663 779 - -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 258 272 - -
Mal4g1821 1014 Gene3D - 484 662 IPR027417 -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 235 257 - -
Mal4g1821 1014 CDD IF2_mtIF2_II 667 759 IPR044145 -
Mal4g1821 1014 Pfam Elongation factor Tu GTP binding domain 492 652 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 MobiDBLite consensus disorder prediction 76 137 - -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 175 191 - -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 327 356 - -
Mal4g1821 1014 TIGRFAM IF-2: translation initiation factor IF-2 408 998 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mal4g1821 1014 CDD mtIF2_IVc 906 988 - -
Mal4g1821 1014 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 794 906 IPR036925 -
Mal4g1821 1014 Coils Coil 746 766 - -
Mal4g1821 1014 Hamap Translation initiation factor IF-2 [infB]. 29 996 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mal4g1821 1014 MobiDBLite consensus disorder prediction 111 126 - -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 153 297 - -
Mal4g1821 1014 Gene3D - 795 899 IPR036925 -
Mal4g1821 1014 TIGRFAM small_GTP: small GTP-binding protein domain 489 650 IPR005225 GO:0005525
Mal4g1821 1014 SUPERFAMILY Translation proteins 663 747 IPR009000 -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 313 366 - -
Mal4g1821 1014 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 40 1006 IPR015760 -
Mal4g1821 1014 PANTHER TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 40 1006 - -
Mal4g1821 1014 PRINTS GTP-binding elongation factor signature 595 604 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 PRINTS GTP-binding elongation factor signature 543 553 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 PRINTS GTP-binding elongation factor signature 559 570 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 PRINTS GTP-binding elongation factor signature 491 504 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 487 660 IPR000795 GO:0003924|GO:0005525
Mal4g1821 1014 Gene3D Translation factors 900 997 - -
Mal4g1821 1014 SUPERFAMILY Translation proteins 902 996 IPR009000 -
Mal4g1821 1014 ProSitePatterns Initiation factor 2 signature. 949 971 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Mal4g1821 1014 MobiDBLite consensus disorder prediction 76 93 - -
Mal4g1821 1014 CDD IF2_eIF5B 490 656 - -
Mal4g1821 1014 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 663 IPR027417 -
Mal4g1821 1014 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1821 Mal-Chr4 34415138 34422462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1821 469 886 Eukaryotic Initiation Factors Gene Family AT1G76810 28.980 4.23e-27 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1821 4 34415138 34422462 Mal4g1821 4 34415138 34422462 ECH