Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1820 ATGGAAGATAATGAATTGAATCACTATGATCATGACCCTCTTCTTCTCACTGATGCTTCTTTTCAACAACAACAACAAGAAACCACTTCCACTGGTGTTTCAAAATCATCATTTAGCTCTCTGAATTCAGCTATGGAGGCAGATCCTAAATCTTGTGGTGGAAACCCTGGTTATGGATTGTGTGTGATAAATGGAAGCTTTGAAAGGAAGAGTTTGCAATTTGATGACCCAATTGTGAATAATTTGGTTGATGGACGATCGATATTAGGGTATTCTATGACTTCACCTGATTTGGTGATCTGTTCTGGCTCACCAGATAATGCTGGAATCAGTTATTGTGATTCTCCTGAAATGTTTAAGAAGAACAAAAATTGCTACAATTTGGATTCATCTATGGAGCTTTCTCTTGAGAATGGAATCAATGGACCTGAAGTTGAAGTTTACAATGTCCATCATAAGACTCCAACTGTTAAATTCTCTGATTTGTGTCAAACTATTGAACCAGAGGAAGAGTTAGTATCACCTGAAGCTTCCTTTGAGCTTCATCCACCGTCGATAACTAAAGATGAGTCGCCCCGAGACCACTCTTCAAACGACGATGAAATGTTAGAAGATGGTACATCGTCTCAGGAGGCAGAGTTGGAGTGCTCAGAAGATGTTGAGGATATTGGGGTAGAAGAGAAGTTTCTGAAGCTGAAAAGAGATTTTGAGTGTCAGAGAAAAGAGCTGGCACAAACAAGGAGGGAGTTGGGGGAGCTCAAGAGGGAGAATCAACAGAAAAGTAGTGAATGTCAAGAAGCTTTGAGATCCTTAAAGGAGCTTCAGAATGAGCTAATGCGCAAGTCGATGCATGTAGGATCTTTAGCATTTGCTATTGAGGGGCAAGTGAAAGAGAAAAGCAAGTGGTTTACATCACTGCGAGACTTGATGAGGAGATTGAAGATTATGAAAATGGAACACATGAAGCTATTAGAGGAAGCAGAAGCATACAAGAAATATGAAGCAGATATAAGTGAAATGGGACTCATCATCAAATCTAAAATGAATGAACAAATAGAGTTGCATGAAGATCTTAAGTCCAAATATATTGAAGGTGCTAAGGTTCAAAAAGAGCTTTATAACAAGGTATTAGAGTTGAGAGGAAACATAAGGGTCTTTTGCCGGTGTAGGCCTCTCAACGCAGAAGAGATGAAAGGAGGAGCCACAATGGCCTTAGATTTTGATTCTGCTAGAGATGGCGAGCTTACTGTAATGTCAAATGGCTCTCCAAAAAAGACTTTTAAATTTGATGCTGTCTTTGGCCCTCAAGTTGAACAAGCTGATATCTTCGAGGACACTGTACCATTTGCAACCTCAGTTTTAGATGGATACAATGTATGCATTTTTGCATATGGGCAGACTGGTACAGGAAAAACCTTCACAATGAAGGGCACAGAAGAGGCTCGAGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGATATAATCAAGGAAAGACAAACCCTCTATCGTTATGATATCTCCGTAAGTGTCTTAGAAGTGTACAACGAGCAAATAAGAGATTTGCTGGTTTCAGGAAATCATCCAGGAATGTCTGCAAGAAGACTTGAGATAAGGCAAGCTGGTGAAGGAATGCATATTCCAGGGTTGGTTGAGGCACATGTGAACAATATGTCTGAAGTGTGGGAAGTCCTACAGACTGGTAGCAATGCAAGGGCTGTAAGCTCAACCAATGCGAATGAGCACAGTAGCCGATCTCACTGCATTCACTGTGTTATGGTTAAGGGAGAAAATTTGTTGAATGGAGAACACACTAAAAGCAAGTTATGGCTTGTGGACTTAGCAGGCAGTGAACGAGTTGCAAAGACAGAGGTGCAAGGTGACAGATTGAAGGAGACACAAAATATTAATAGGTCTCTTTCTGCACTTGGTGATGTCATTTCAGCTCTTGCAACTAAAAGTTCACACATCCCTTTCAGGAACTCCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCAAAGACACTCATGTTTGTACAGATCAGTCCTAATGAAAATGATTTGGGCGAGACGATTTGCTCTTTGAACTTTGCTAGTAGAGTAAGGGGAATAGAATTGGGCCCTCCCAAAAAGCAGTGGGACACAATTGAGCTTCTGAAACACAAACAGATGGCTGAAAAAACTAAACAAGAGCTAAAGTTGAAGGACTTTCAAATCAAGAAGATGGAGGAAACAATCCATGGATTCGAGTCCAAGATGAAGGAAAAGGATCATAAAAACAAAACTCTTCAAGATAAGGTGAAGGAGCTGGAATCACAACTTATGATTGAGAGAAAGCTAGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCAAATGAAACATCAAGAAGAGCAAACCAATTCAATTTTGAGATCAACACCACTTGCGAATCGACCATTAGCAACTCTAAAGAATTTTAATGATCCAGCAAGACCCTCAATGGAGAACAACATCTTGAAACCTCGTAATATACCCTTTTCTACAATAGAGAGCTCCATCGAGTACATTGATCACAATGAGAAAGAAAACAATCCTGACTTGGCCGATAATAAATCGATACTTCCAAAAAGGGCATCAAGAGCTTCTATGTATACAATGATGACACCACGCATTCCTTCGGCAACTACTTCAAGGAGAAACTCTCTAATTCCACTCCCAAGCTTAACACAGTTTCAAACACCATTCATTCCCAAGTTATCAAACCAAGAAGTCAATGAGGAATCAGAATCACAACCATTACAAGCTCATAATAGTGAGAGTCCAAAAGAAGTTAAAAGTGGTGTTAAGAAGATAGGTAGCATACTAAGAAGAAGCATACATAAGAAAGGTCAAGTTAGGTCTCCACTACAACAGCACATGAGAAAAGTTGGTGGTGTAAATGTAGGGATGGAGAAAGTGAGAGTCTCTATTGGAAGTAGAGGGAAATTAGCACAAAGGGGGGTGCAAGTTGGAAATGGTAGTAGAAGAGGTGGTGGAGCTAAAGAGATTCAACACAAGAATAGTCATAAGGACAAGGAAAGGGGATGGATATAA 3090 0.4013 MEDNELNHYDHDPLLLTDASFQQQQQETTSTGVSKSSFSSLNSAMEADPKSCGGNPGYGLCVINGSFERKSLQFDDPIVNNLVDGRSILGYSMTSPDLVICSGSPDNAGISYCDSPEMFKKNKNCYNLDSSMELSLENGINGPEVEVYNVHHKTPTVKFSDLCQTIEPEEELVSPEASFELHPPSITKDESPRDHSSNDDEMLEDGTSSQEAELECSEDVEDIGVEEKFLKLKRDFECQRKELAQTRRELGELKRENQQKSSECQEALRSLKELQNELMRKSMHVGSLAFAIEGQVKEKSKWFTSLRDLMRRLKIMKMEHMKLLEEAEAYKKYEADISEMGLIIKSKMNEQIELHEDLKSKYIEGAKVQKELYNKVLELRGNIRVFCRCRPLNAEEMKGGATMALDFDSARDGELTVMSNGSPKKTFKFDAVFGPQVEQADIFEDTVPFATSVLDGYNVCIFAYGQTGTGKTFTMKGTEEARGVNFRTLEKMFDIIKERQTLYRYDISVSVLEVYNEQIRDLLVSGNHPGMSARRLEIRQAGEGMHIPGLVEAHVNNMSEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGEHTKSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKTLMFVQISPNENDLGETICSLNFASRVRGIELGPPKKQWDTIELLKHKQMAEKTKQELKLKDFQIKKMEETIHGFESKMKEKDHKNKTLQDKVKELESQLMIERKLARQHVDSKIAEQHQMKHQEEQTNSILRSTPLANRPLATLKNFNDPARPSMENNILKPRNIPFSTIESSIEYIDHNEKENNPDLADNKSILPKRASRASMYTMMTPRIPSATTSRRNSLIPLPSLTQFQTPFIPKLSNQEVNEESESQPLQAHNSESPKEVKSGVKKIGSILRRSIHKKGQVRSPLQQHMRKVGGVNVGMEKVRVSIGSRGKLAQRGVQVGNGSRRGGGAKEIQHKNSHKDKERGWI* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1820 1029 Gene3D Kinesin motor domain 377 750 IPR036961 -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 1001 1029 - -
Mal4g1820 1029 PANTHER KINESIN-LIKE PROTEIN KIN-14Q 215 1012 - -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 920 940 - -
Mal4g1820 1029 CDD KISc_C_terminal 380 709 - -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 186 202 - -
Mal4g1820 1029 SMART kinesin_4 380 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 Coils Coil 236 284 - -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 920 947 - -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 170 215 - -
Mal4g1820 1029 ProSitePatterns Kinesin motor domain signature. 607 618 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mal4g1820 1029 Coils Coil 306 326 - -
Mal4g1820 1029 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 PRINTS Kinesin heavy chain signature 577 594 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 PRINTS Kinesin heavy chain signature 608 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 PRINTS Kinesin heavy chain signature 657 678 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 Coils Coil 728 783 - -
Mal4g1820 1029 ProSiteProfiles Kinesin motor domain profile. 382 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 Pfam Kinesin motor domain 388 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mal4g1820 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 745 IPR027417 -
Mal4g1820 1029 MobiDBLite consensus disorder prediction 1011 1029 - -
Mal4g1820 1029 PANTHER KINESIN-LIKE PROTEIN KLP-3 215 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1820 Mal-Chr4 34403848 34409503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1820 357 734 Calmodulin-binding Proteins AT5G65930 42.037 4.00e-78 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1820 4 34403848 34409503 Mal4g1820 4 34403848 34409503 ECH