Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0566 ATGGTTTTCTCTTCTATTCCATCTTATTTAGATCCTCTCAATTGGCAGCAACAACCAAATCAACATCAGTTGCTTCCACCACTATCCTCATCACAGCCACATGGTGCAGGCTCAATTATCAGGCCCGGTTCGATACCGGATCAAGCTCAAGCTCAAGCAGCTCATGAAGTTCAAAAAGGTCAGGCTCAGACTCAACAAGCTAAATTACCACCACCTTCGGAGACAGCTTTAAAGTGTCCTCGTTGCGAATCAACCAACACAAAATTTTGTTACTACAACAACTATAACTTGTCTCAACCAAGACACTTTTGTAAGACATGTAGGCGTTATTGGACAAGAGGGGGTGCATTAAGAAATGTTCCTGTTGGTGGAGGGTGTCGTAGAAGCAAAAAGACCAAAAAGAGTAACACCAGTACTACTCCCTCCAAATCTCCAATATCTAATAGTAATGAAAAAGATTATTCATCAAGTGCAGTTCATTCAACTTCAACTCCTCATGGTGATCAATTTTTACATCCAAGTAGCAGAAATTACTTGAACATGGCATCTCTTCAGAATCTGAATCGCTTTGGTGTTGGAAACATGTTTCAAATTGGAGATTATAGTTCAAATACTGGTGGAGGAGAAGGTGGAGTTGTGGATCAGTGGAGATTTCAGCAATTTCCTTTCATGAATAATGGCTTTGATTCAAATAATTCAAATGTTTCTTTCCCATTTCAAAGTGAAATTGTTGAACCAACAACTACTTCTAGGGTTACAACTCTGATGCCTGCATCGGTTAAATCCGAACACAACGGAGGTTTTAATCCGCTTAGATCTCCAATGAGTATGTCAGAGAATAACAACCATTACAATAATTCATGGACTGATTATCCTGGTCTTGCATCTTCTTCCGCTAGTCGTCTCTTGTAA 912 0.3969 MVFSSIPSYLDPLNWQQQPNQHQLLPPLSSSQPHGAGSIIRPGSIPDQAQAQAAHEVQKGQAQTQQAKLPPPSETALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRSKKTKKSNTSTTPSKSPISNSNEKDYSSSAVHSTSTPHGDQFLHPSSRNYLNMASLQNLNRFGVGNMFQIGDYSSNTGGGEGGVVDQWRFQQFPFMNNGFDSNNSNVSFPFQSEIVEPTTTSRVTTLMPASVKSEHNGGFNPLRSPMSMSENNNHYNNSWTDYPGLASSSASRLL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0566 303 MobiDBLite consensus disorder prediction 20 78 - -
Mal4g0566 303 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Mal4g0566 303 MobiDBLite consensus disorder prediction 121 172 - -
Mal4g0566 303 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Mal4g0566 303 MobiDBLite consensus disorder prediction 54 71 - -
Mal4g0566 303 MobiDBLite consensus disorder prediction 20 37 - -
Mal4g0566 303 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 24 299 - -
Mal4g0566 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 299 IPR045174 GO:0003700|GO:0006355
Mal4g0566 303 MobiDBLite consensus disorder prediction 135 172 - -
Mal4g0566 303 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0566 Mal-Chr4 5631125 5632230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0566 1 265 C2C2-Dof Transcription Factor Family AT2G37590 36.728 1.45e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal4g0566 zf-Dof 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0566 - - cam:101511165 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0566 4 5631125 5632230 Mal4g0566 4 5631125 5632230 ECH
Mal4g0566 4 5631125 5632230 Mal7g2265 7 80338366 80339660 PCT