Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3638 ATGGCTGAATCAGAAGACATTCAGCCCTTGGTCTGCGATAATGGAACCGGCATGGTCAAGGCTGGTTTTGCAGGAGATGATGCACCAAGGGCAGTATTCCCTAGCATAGTAGGTAGACCACGTCACACAGGGGTAATGGTTGGAATGGGACAAAAAGATGCATATGTTGGTGATGAAGCACAATCAAAAAGAGGTATTTTGACATTGAAATACCCAATTGAGCATGGGATCGTTAGTAACTGGGATGATATGGAGAAGATCTGGCATCATACTTTCTACAATGAACTTCGTGTTGCTCCTGAAGAACACCCTGTTCTTCTCACTGAAGCTCCTCTTAACCCTAAGGCTAATCGTGAAAAAATGACTCAGATCATGTTTGAGACATTCAATACTCCTGCTATGTATGTTGCTATTCAAGCTGTGCTTTCCCTTTATGCTAGTGGACGTACAACTGGTATTGTTCTGGATTCTGGGGATGGTGTTAGTCACACGGTTCCTATTTATGAGGGCTATGCACTTCCACATGCAATCCTTCGTCTGGATCTTGCAGGTCGTGATCTCACTGATGCATTGATGAAGATTTTAACCGAGCGTGGCTACACTTTCACCACTTCAGCAGAGCGAGAAATTGTGAGGGATATGAAGGAGAAATTGGCTTATATTGCTCTTGATTATGAGCAGGAGTTGGAAACCGCTAAGACCAGCTCAGCTGTTGAGAAGACCTATGAGCTACCTGATGGGCAGGTGATCACGATCGGTGCTGAAAGATTCCGATGCCCTGAAGTTTTGTTCCAGCCATCTATGATAGGGATGGAATCTCCTGGTATTCATGAGACAACATTTAACTCGATCATGAAGTGTGATGTCGACATTAGGAAGGATCTCTATGGTAACATTGTGTTGAGTGGTGGTTCTACAATGTTTCCTGGTATTGCTGATAGGATGAGCAAGGAGATTACAGCATTGGCACCTAGTAGCATGAAAATCAAAGTTGTCGCACCACCAGAGAGGAAGTACAGTGTCTGGATTGGAGGTTCCATTTTGGCATCCCTCAGCACTTTCCAACAGATGTGGATTGCAAAGGCAGAATATGATGAATCTGGGCCATCAATAGTACACAGGAAATGCTTCTAA 1134 0.4418 MAESEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYTFTTSAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKTYELPDGQVITIGAERFRCPEVLFQPSMIGMESPGIHETTFNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3638 377 Pfam Actin 5 377 IPR004000 -
Mal3g3638 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Mal3g3638 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Mal3g3638 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Mal3g3638 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Mal3g3638 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Mal3g3638 377 PANTHER ACTIN 1 376 IPR004000 -
Mal3g3638 377 SMART actin_3 7 377 IPR004000 -
Mal3g3638 377 Gene3D - 10 371 - -
Mal3g3638 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Mal3g3638 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Mal3g3638 377 PRINTS Actin signature 28 37 IPR004000 -
Mal3g3638 377 PRINTS Actin signature 51 62 IPR004000 -
Mal3g3638 377 PRINTS Actin signature 63 85 IPR004000 -
Mal3g3638 377 PRINTS Actin signature 117 130 IPR004000 -
Mal3g3638 377 PRINTS Actin signature 142 161 IPR004000 -
Mal3g3638 377 PRINTS Actin signature 238 254 IPR004000 -
Mal3g3638 377 Gene3D - 140 340 - -
Mal3g3638 377 PANTHER ACTIN-97 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3638 Mal-Chr3 113720680 113722552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3638 1 377 Cytoskeleton Gene Families AT5G09810 95.756 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3638 K10355 - gmx:100807341 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3638 3 113720680 113722552 Mal3g3638 3 113720680 113722552 ECH
Mal3g3638 3 113720680 113722552 Mal1g3639 1 68013241 68016297 PCT