Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0760 ATGGTCTTCCCCTCCCTTCCAATCTATCTAGATCCACCCAACTGGTCACAACAGCAAGCAGGAATTGGTACTGGCACTCAAAATCCATCACCTTTGCAGCTGCAATCAGCTTCACCGGTGACTTTCACCGTTGAAACTGATGGCAGCTACATAGGGTCTAGAAGACCAGGATCGATAACCGATCAAGCTAAGATGTCAAAGGTACACCAAAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGCTACTACAACAACTACAATCTTTCACAGCCGCGCCATTTTTGCAAAACATGTCGTCGTTATTGGACTAAAGGGGGTGCACTTAGAAATGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAAAAAAAGAAGCAAAGGAAATTCAGTAACAAAATCACCTTTGAAACCTAATCGTAATGATGGTGCTGCTGCTGCTGGTTCAAGTGCAAATTCTTCATCTAATAATGGTTGCACTAATTCTAATGTGAATGTGGGAGTGTCTCATTTTCCAACTCAATTTCCATTCTTAACCTCTTTGCATCATTATAACAACAATGATTATGTTTCTGAGGGTAATGGTTCTTTGTTGGCAAAAAATATGAGCAATAGTACTACTACTACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATAGTAATGGTGGCTCTTTGTTGATATCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAGCAGCAACAATATCAACAATTCCCTTTCTTGAGTAATTTGGAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATAGTGAACCTCAAAGAAATTCGTTGCGTTCTAAGGCAACGGATTCTTTAAGTGTTAGTATTGGAATGATGCCTCAAGTTAAAGTGGAAGAAAACAGTCCTCAAGGGTTGAGTTTGCCAAAAAATCTCTTAAGTGGTTCAGGTAATAGTAATGATCTATTTTGGAATGGAAATGGAAGTGGAAGTGGGAGTGGTAATGGAAATGCATGGAGTGAAGTTCCTAGTTTCACTCCATCACCAAGTCAATTGTTGTGA 1101 0.3942 MVFPSLPIYLDPPNWSQQQAGIGTGTQNPSPLQLQSASPVTFTVETDGSYIGSRRPGSITDQAKMSKVHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNKKRSKGNSVTKSPLKPNRNDGAAAAGSSANSSSNNGCTNSNVNVGVSHFPTQFPFLTSLHHYNNNDYVSEGNGSLLAKNMSNSTTTTNVEFQLGSGSSIGNSNGGSLLISNGIGEQWRFPNSLQVHQQQQYQQFPFLSNLEPQIGLFQFGGENNSEPQRNSLRSKATDSLSVSIGMMPQVKVEENSPQGLSLPKNLLSGSGNSNDLFWNGNGSGSGSGNGNAWSEVPSFTPSPSQLL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0760 366 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Mal3g0760 366 MobiDBLite consensus disorder prediction 336 366 - -
Mal3g0760 366 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Mal3g0760 366 MobiDBLite consensus disorder prediction 277 298 - -
Mal3g0760 366 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 24 359 - -
Mal3g0760 366 MobiDBLite consensus disorder prediction 121 165 - -
Mal3g0760 366 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 359 IPR045174 GO:0003700|GO:0006355
Mal3g0760 366 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0760 Mal-Chr3 28659757 28661200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0760 1 131 C2C2-Dof Transcription Factor Family AT2G37590 48.966 2.80e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal3g0760 zf-Dof 2.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0760 - - cam:101502096 459.529