Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5358 ATGGATATAGATCTCAGGTTACCCACTGGTGAACATGATAAAGAGGAAGAAGAAACACCTACACTTGATAACATGTTGGAAGGTGAAGAAAAATTGCACAATGGAGGTATAGATGGCAGACATATGGTTGATGTTGGCATCGAGGTACATGCTCTAAATGGTGGAGATTTGAATTCTCCCACAGTTGATATCGCAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTCGAGTCTCATGGGGAAGCGTATTCTTTCTACCAAGAATATGCTCGGTCGATGGGATTCAACACTGCAATACAAAATAGCCGTCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGAGAGTATGATAAATCCTTCAATCGACCACGAGCACGACAGAACAAGCAAGAATCTGAAAATTCAACTGGTCGAAGATCTTGCTCTAAGACCGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCAGATGGGAAATGGGTTATACATAGCTTTGTGAAGGAGCATAATCATGATCTTTTACCTGCCCAAGCAGTAAGTGAGCAAACAAGAAGAATGTACGCTGTGATGGCCAGGCAATTTGCAGAATACAAAACTGTGGTTGGTGTCAAGAATGAAAAGAATCCGTTCGATAAAGGTCGGAATTTGGGTCTGGAGTTTGGGGAGGCTAAACTTATGCTTGATTTTTTTGTTCAGATGCAAAACATGAATTCTAACTTCTTTTATGCCGTAGATCTCGGTGAAGATCAGCGTCTGAAAAGTCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTCTGTGATGTAGTATCATTTGATACCACCTATGTTCGTAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGGGTGAACCAGCACTACCAATTTATATTACTTGGGTGTGCCTTGATATCAGATGAAAGTGCCGCAACTTTTTCTTGGCTATTACAGACGTGGCTGAAAGGTGTAGGTGGTCAAGTTCCAAAAGTGATCATTACTGACCATGACATTACTTTGAAGTCAGTTATTTCAGATGTATTTCCTAGTGCTTGCCATTGTGTTTGCTTATGGCATATACTGGGGAAGGTATCTGAAAATTTAGGTCCTGTAATTAAAAAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATATATAGGTCATTGACTAGCGATGATTTTGACAATAGATGGGAGAAAATTTTGGATAGATTTGAGCTTCGACAGGATGAATGCATGCAATCTTTGTATGAAGATCGCAAGTTATGGGCACCAACATTCATGAAGGATGTATTCTTAGGTGGCATGTCTACTGCCCAACGATCTGAAAGTGTAAATTCCTTCTTTGACAAATATGTTCATAGGAAGACCTATGTGCAAGATTTTGTTAAACAGTACGAAACCATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAACATTAAAAACTCCTTCACCTTTAGAAAAGAGTGTTGCAGGGATTTGCACCCATACAGTATTCAAGAAGATTCAAGCTGAGATTATTGGTGCAGTGGCTTGTCATCCTAAACTTGACAGGGAGGATGAGACAATTGTTGTTCAAAGGGTGCATGATATGGAAACAGAAAAAGACTTTTTTGTTGTGGTGAATGAAGTAAAATCAGAGTTGTCTTGTATATGTCGGCTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGGTGGTTCTTCAATATTCTGGCCATTCAGTATTCCCATCTCAATATGTTTTGAAACGGTGGACAAAAGATGCAAAGGTCAGAAATGTAACAGGAGAAGAATATGAACATATGCTGGCTAGGGTGCAACGGTACAATGATTTATGTCATCGATCACTAAAACTCAGTGAAGAGGGATCATTGTCTCAAGATAGTTATAGTATTGCATTCCATGCACTAAATGAGGCGCACAAAAGTTGTGTAAGTGTTAACAATTCTAGTAAGAGTCCTACAGAAGCTGGTACATCTGGTGCTCATGGTCAGCTTTCCATTGAAGAAGATACCCAAAGTAGAAATATGGGAAAGACAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTAAACTCAGAAGCAGAAGTGATGACTGTCGGAGCACTAGACAACTTGCAACAAATGGACAAATTCAGCACAAGAGCTGCAGTAACCCTTGATGGTTACTATGGCACCCAACAGAGTGTGCAGGGAATGTTGAACTTAATGGGACCGACACGTGATGATTACTACGGGAATCAGCAGACTCTTCAGGGACTGGGACCAATAAACTCCATACCAACCAGCCACGATGGTTATTATGGTGCACATCAAAGCATGCCCGGTTTGGCGCAACTGGATTTTTTGCGAACTGGTTTCACGTATAGCATTAGGGATGATCCTAATGTTAGAGCACCACAGGAAACTTTGAGCTGCTCATCTGATGTAGAGAATGGAATACCTCAAAGCCCAATTGAGTTTGTGTTGGTGCTTAGACAAGAGGTGTCGATGTCGGCGACGGCGAGGTGGAGACTGTGTGGGAAGAACAAGTCACCATTAATTTATCCTTCCAAGCCCATTGCCGAAACAATGAACTATCTGAAACAATTCCATCATAGTGGAACCGTTTTTGGCAGTGGTGGATTGTATTGCCTCCGTCTTGGTTGTAGAGCTTGA 2757 0.4004 MDIDLRLPTGEHDKEEEETPTLDNMLEGEEKLHNGGIDGRHMVDVGIEVHALNGGDLNSPTVDIAMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHDLLPAQAVSEQTRRMYAVMARQFAEYKTVVGVKNEKNPFDKGRNLGLEFGEAKLMLDFFVQMQNMNSNFFYAVDLGEDQRLKSLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAATFSWLLQTWLKGVGGQVPKVIITDHDITLKSVISDVFPSACHCVCLWHILGKVSENLGPVIKKHENFMAKFEKCIYRSLTSDDFDNRWEKILDRFELRQDECMQSLYEDRKLWAPTFMKDVFLGGMSTAQRSESVNSFFDKYVHRKTYVQDFVKQYETILQDRYEEEAKADSDTWNKVATLKTPSPLEKSVAGICTHTVFKKIQAEIIGAVACHPKLDREDETIVVQRVHDMETEKDFFVVVNEVKSELSCICRLFEYKGYLCRHALVVLQYSGHSVFPSQYVLKRWTKDAKVRNVTGEEYEHMLARVQRYNDLCHRSLKLSEEGSLSQDSYSIAFHALNEAHKSCVSVNNSSKSPTEAGTSGAHGQLSIEEDTQSRNMGKTNKKKNPTKKKKVNSEAEVMTVGALDNLQQMDKFSTRAAVTLDGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPINSIPTSHDGYYGAHQSMPGLAQLDFLRTGFTYSIRDDPNVRAPQETLSCSSDVENGIPQSPIEFVLVLRQEVSMSATARWRLCGKNKSPLIYPSKPIAETMNYLKQFHHSGTVFGSGGLYCLRLGCRA* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5358 918 Pfam MULE transposase domain 288 380 IPR018289 -
Mal2g5358 918 MobiDBLite consensus disorder prediction 132 165 - -
Mal2g5358 918 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Mal2g5358 918 Pfam FAR1 DNA-binding domain 89 191 IPR004330 -
Mal2g5358 918 MobiDBLite consensus disorder prediction 1 21 - -
Mal2g5358 918 MobiDBLite consensus disorder prediction 678 706 - -
Mal2g5358 918 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 38 779 - -
Mal2g5358 918 Pfam SWIM zinc finger 569 602 IPR007527 GO:0008270
Mal2g5358 918 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 779 IPR031052 GO:0006355
Mal2g5358 918 SMART 26again6 579 606 IPR006564 GO:0008270
Mal2g5358 918 MobiDBLite consensus disorder prediction 678 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5358 Mal-Chr2 128335752 128340521 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g5358 FAR1 4.3e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5358 2 128335752 128340521 Mal5g1965 5 42725310 42728735 PCT