Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5357 ATGTCTCCACCATTTTCTTTCACTCTTTCCCTTCTCTTTTTCATCCTCTTGACACCATTATTACTCTTAGCTCAATCTCAATCTCAATCCCCACCACCTCCTTCTTCTTCTTCTGCTGCTTGCAAAGGGACATTGTATCCAAAACTATGTCGTGCTATGCTATCTACCATTCGTTCATCACCTTCAGATCCATATAACTATGGAAAATTCTCCATAAAACAAAACCTAAAACTAGCAAGAAAACTATCAAAAATATTTTTAGATTTCCTCAAACGTCATCAATCATCTTCATCTCATGAAGAAATAGGTGCATTAGTTGATTGCAAAGACCTTAACCAACTCAATGTAGATTACTTAGAATCAATCTCAGATGAACTCAAATCAGCTACTACTTCATCATCAGATAATGAACTTGTTGATAAAATTGAAAGCTATCTTAGTGCTGTTGCTACTAATCATTATACATGCTATGATGGGTTGGTTGTGACAAAAAGTAACATTGCTAATGCTCTTGCTGTTCCATTGAAAGATGCTACACAATTTTATAGTGTTTCACTTGGATTGGTAACTGAAGCTTTGAATAAAAATATGAAAAGGAATAAGACTCGCAAACATGGTCTTCCTAATAAGTCATTCAAAGTTAGACAGCCACTTGAGAAGCTAATCAAGCTTCTCCGCACAAAATATAGTTGCCAAAAAACATCCTCCAATTGTACAAGTACTAGAACAGAAAGGATTCTTAAGGAAAGTGAAAGCCAAGGAATTCTATTAAATGATTTTGTGATTGTGAGTACTTATGGGATAGCCAATCACACTTCCATTGGAGATGCTATTGCTGCTGCACCAAATAACACAAAGCCACAAGATGGTTATTTCCTTATCTATGTTAGAGAAGGATACTATGAGGAATATGTAATTGTTCCTAAACACAAGAATAATATTCTTCTAGTTGGAGATGGTATTAACATGACAATCATCACTGGAAACCATAGTGTCATAGATGGTTGGACAACTTTCAATTCTTCCACATTTGCTGTTTCTGGAGAAAGATTTATAGCAGTAGACATTACATTCAGAAACACAGCTGGACCTGAAAAACACCAAGCAGTAGCAGTAAGAAACAACGCCGACCTCTCAACATTCTACCGATGTAGTTTCGAAGGATATCAAGACACACTCTATGTCCACTCTTTAAGACAATTCTACAGAGATTGCAAAATCTATGGTACCGTCGACTTCATTTTCGGCAATGCAGCTGTAGTTTTCCAGAATTGTAACATCTATGCAAGAAAACCATTGCCAAATCAGAAAAATGCTGTCACAGCACAAGGTAGAACTGATCCAAATCAAAACACAGGAATTTCAATCCAAAATTGCACAATTGATGCTGCACAAGATTTGGCTAATGACTTGAATTCAACAATGAGTTACTTAGGTAGACCATGGAAGATTTATTCAAGGACTGTTTATATGCAATCATATATTGGTGATTTTGTTCAACCTTCTGGTTGGTTAGAGTGGAATGGAACAGTTGGATTAGACACTATTTTTTATGGGGAATTTGATAACTATGGACCTGGTTCTGCAACTAACAATAGGGTTCAATGGCCTGGTTATTTTCTTTTGAATGATACTCAAGCTTGGAATTTCACTGTTCTTAACTTTACTTTGGGAAATACTTGGCTTCCTGATACTGATATACCTTATACTGAAGGATTACTAAACTAG 1728 0.3594 MSPPFSFTLSLLFFILLTPLLLLAQSQSQSPPPPSSSSAACKGTLYPKLCRAMLSTIRSSPSDPYNYGKFSIKQNLKLARKLSKIFLDFLKRHQSSSSHEEIGALVDCKDLNQLNVDYLESISDELKSATTSSSDNELVDKIESYLSAVATNHYTCYDGLVVTKSNIANALAVPLKDATQFYSVSLGLVTEALNKNMKRNKTRKHGLPNKSFKVRQPLEKLIKLLRTKYSCQKTSSNCTSTRTERILKESESQGILLNDFVIVSTYGIANHTSIGDAIAAAPNNTKPQDGYFLIYVREGYYEEYVIVPKHKNNILLVGDGINMTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRDCKIYGTVDFIFGNAAVVFQNCNIYARKPLPNQKNAVTAQGRTDPNQNTGISIQNCTIDAAQDLANDLNSTMSYLGRPWKIYSRTVYMQSYIGDFVQPSGWLEWNGTVGLDTIFYGEFDNYGPGSATNNRVQWPGYFLLNDTQAWNFTVLNFTLGNTWLPDTDIPYTEGLLN* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5357 575 Pfam Pectinesterase 261 558 IPR000070 GO:0030599|GO:0042545
Mal2g5357 575 CDD PMEI-like_3 41 191 - -
Mal2g5357 575 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 181 IPR006501 GO:0004857
Mal2g5357 575 Pfam Plant invertase/pectin methylesterase inhibitor 38 187 IPR006501 GO:0004857
Mal2g5357 575 Gene3D - 259 575 IPR012334 -
Mal2g5357 575 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Mal2g5357 575 SUPERFAMILY Pectin lyase-like 259 572 IPR011050 -
Mal2g5357 575 PANTHER PECTINESTERASE 9 573 - -
Mal2g5357 575 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 192 IPR035513 -
Mal2g5357 575 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 190 IPR035513 -
Mal2g5357 575 SMART PMEI_2 32 188 IPR006501 GO:0004857
Mal2g5357 575 PANTHER PECTINESTERASE 9 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5357 Mal-Chr2 128302110 128306457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5357 5 575 Carbohydrate Esterase AT3G10720 57.556 0.0 704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5357 2 128302110 128306457 Mal5g1921 5 40987820 40992638 PCT