Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5356 ATGTCTTTCTTCAAATCCTATGGAAAAGTTGATGAACATGATCAAATGATGTTAGAATCGAAGAGAAAAACCCGAAAGCGAATCACAATCATAAGCTTATCCTCAATGATCTTTGTTGGTGTTGTAATTGCAGCTATATTTGGAATTGTTAACAGCTCAAAAAATGATGATGACACATCTCAAAATTCAGTGACTAATTCAATGAAAGCTGTTTGTGATGTTACATTGTACAAGGATTCATGTTATAACAGCCTTGGTTCTGTTGTACAAGGAAAAGAGGTTCAACCTGAGGAGTTGTTCAAGTTATCAATCAATGTGGCATTAACTCATGTGTCCAAAGCTATTGAGTATTTCAATGAACATGGTGTTTTCAAAAGGTTGAATTATGATAGTAGAACTAAGAAAGCTTTGAAAAATTGTAGGGATCTTTTGGACCTTGCTATTGATCATTTGAATAGCTCATTGACTACTTCAGTGGAAAATTCTTCACTTCTTCAAGTTTTTGATGATCTACAAACATGGTTAAGTGCTGCAGGTACATACCAACAAACTTGCATTGAAGGTTTTAAGGATACAAAAAAACAGTTAAAGACAAGTGTAGAAAGCTACCTTAAAAATTCTACAGAGTACACAAGCAACAGTCTTGCCATCATTACATGGATTAACAAGGCTGCAAGCACTCTCAATTTGAGACGTTTATTGAGCTTACCATATGAAAATGAAGCACCAAAATGGCTTCATTCAAAAGATAGAATACTACTTAGTACAAAGGATTTGAGATCAAAAGCTGATATTGTTGTTTCTAAAGATGGTAGTGGGAAATATAAAACTATATCTGATGCACTTAAACATGTTCCTAATAAGAGTAAGAAGAGGACTTTGATCTATGTGAAGAAAGGGATTTACTATGAAAATGTAAGGGTAGAAAAGACAAAATGGAATGTGATGATTATTGGTGATGGTATGAGTGCTTCAATTGTATCTGGAAGGCTTAACTTTGTGGATGGTACACCAACATTTTCAACTGCAACATTTGCTGTATTTGGAAGGAATTTCATAGCTAGAGACATGGGTTTTCGCAATACAGCAGGTCCACAGAAGCATCAAGCAGTAGCACTAATGACAAGTGCTGATCAAGCAGTTTACTACAAATGTCACATTGATGCTTATCAAGACACTCTTTATGCTCATTCCAATCGCCAATTCTATAGAGAATGTAACATTTATGGAACAGTTGATTTCATTTTTGGAAATTCTGCAGTTGTGATTCAAAATTGCAATATTATGCCAAAGGTACCTATGCATGGACAACAAATCACAATCACAGCACAAGGAAAAACTGACCCTAACATGAACACAGGTATCTCAATTCAATATTGTAACATTTCACCTTATGGAAACTTGAGTAATGTTAAAACATACCTTGGAAGACCTTGGAAGAATTACTCAACCACAGTTTACATGAGATCAAGAATGGATGGTTTTATTAATCCAAATGGTTGGTTGCCTTGGGTTGGAAACTCAGCACCAGATACAATTTTTTATGCAGAATTTCAGAATGTTGGACCAGGTGCTTCAACAAAGAATAGAGTGAAGTGGAAGGGTTTGAAAAATATTACTAGTAAACAAGCTAGTAAGTTTTCAGTTAAGGCTTTTACTCAAGGAGATAGATGGATTCCTGCATCAGGTGCACCTTTTAGGTCTAATATATGA 1713 0.3497 MSFFKSYGKVDEHDQMMLESKRKTRKRITIISLSSMIFVGVVIAAIFGIVNSSKNDDDTSQNSVTNSMKAVCDVTLYKDSCYNSLGSVVQGKEVQPEELFKLSINVALTHVSKAIEYFNEHGVFKRLNYDSRTKKALKNCRDLLDLAIDHLNSSLTTSVENSSLLQVFDDLQTWLSAAGTYQQTCIEGFKDTKKQLKTSVESYLKNSTEYTSNSLAIITWINKAASTLNLRRLLSLPYENEAPKWLHSKDRILLSTKDLRSKADIVVSKDGSGKYKTISDALKHVPNKSKKRTLIYVKKGIYYENVRVEKTKWNVMIIGDGMSASIVSGRLNFVDGTPTFSTATFAVFGRNFIARDMGFRNTAGPQKHQAVALMTSADQAVYYKCHIDAYQDTLYAHSNRQFYRECNIYGTVDFIFGNSAVVIQNCNIMPKVPMHGQQITITAQGKTDPNMNTGISIQYCNISPYGNLSNVKTYLGRPWKNYSTTVYMRSRMDGFINPNGWLPWVGNSAPDTIFYAEFQNVGPGASTKNRVKWKGLKNITSKQASKFSVKAFTQGDRWIPASGAPFRSNI* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5356 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 221 IPR035513 -
Mal2g5356 570 ProSitePatterns Pectinesterase signature 2. 408 417 IPR033131 -
Mal2g5356 570 SUPERFAMILY Pectin lyase-like 261 567 IPR011050 -
Mal2g5356 570 CDD PMEI-like_3 70 223 - -
Mal2g5356 570 Pfam Pectinesterase 264 556 IPR000070 GO:0030599|GO:0042545
Mal2g5356 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 222 IPR035513 -
Mal2g5356 570 PANTHER PECTINESTERASE 5 568 - -
Mal2g5356 570 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 221 IPR006501 GO:0004857
Mal2g5356 570 Gene3D - 259 570 IPR012334 -
Mal2g5356 570 PANTHER PECTINESTERASE 5 568 - -
Mal2g5356 570 SMART PMEI_2 63 217 IPR006501 GO:0004857
Mal2g5356 570 Pfam Plant invertase/pectin methylesterase inhibitor 67 217 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5356 Mal-Chr2 128296914 128301103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5356 7 570 Carbohydrate Esterase AT3G10710 57.469 0.0 683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5356 2 128296914 128301103 Mal5g1918 5 40968085 40971291 PCT