Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5324 ATGGAAGAAGGGTTAGGTCAACACTCAGTTCCTCCTCCGGGTTCCATTGACAAGTATAAGATTCTGGATATTAAGCCTATAAGAAGTTTGATACCTGTTTTTTCAAAGAATCCTCAAGGTCAATCTTCAGGTCAGTATCCTTCTGGGTTTTCTCCATTTTTCCCATTCGGTGGACCTCATGAGACTTCAACCACTGGGGTAAAGCCAAGGGGTAGAGCGATGCCGACTCCACTTCAAGCATTTAGGAGCCCTTTTGGAGAGGATGATGATGATGATGGTTTTAGTAACAAAAGAAATGCAGCATCACGTTCAAGCCGGGTCAAATTGAAGAAGCAGAAGGTATATAATGATTTTCATGTTGACTTGAGTGCTTTAGTTGGTATAAGCCCGGGACAAAGAGACAACGGTAACCGTGAAGTTGTTAATATTGTGCTCATGTCATTTGATGCACTAAGAAGAAGGCTATCTCAACTTGTAGATGCCAAGGAATTGAACACGGGTTTGATCAAGCGTACGGATTTAAAAGCTGGCAATGTTTGTATGACCAAAGGAATTCGAACAAACACAGCGAAGAGGGTAGGATCGGTACCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAAATGTGTGTTATCGGTTTGCATGCTCAATCCATGGGGGGGATTGATGCCTTGCATATCCAGAGTGACCGTGGGGAAGAGACTTTGGCTGTTAGCATTGTTTCGTCAGGAGAATATGACGATGAAGCTGACGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAAGGGTAATCTTGCTTTGGATAGAAGTTCACGAACACACAATGAAGTAAGAGTCATCCGAGGCATCAAAGATGCTGTGAATCCAGGCGCAAAAATCTACGTCTATGATGGTCTGTATAAAATTCAAGATTCATGGGTTGAAAAAGCAAAAGGAGGCGGTGGCTTGTTTAAGTATAAGTTGATAAGAGTGCCTGGACAACCTAGTGCCTTTGCCGTTTGGAAATCTGTTCAGAAGTGGAAATCTGGCTTCCCTGCAAGGACTGGGCTTATTCTTGCTGACCTCTCCTCGGGAGCCGAGAGTCTTCCTGTATCACTTGTCAATGAAGTCGATAACGTGAAGTCACCTGCCTTTTTCACATATTTCCACTCTCTTAGACATCCGAAATCATTCAGTTTAATGCAGCCTTCACATGGTTGCAGCTGTAGTAGCAAAAAAGCATGTGTCCCTGGCGATTTGGACTGCTCTTGCATTCGGAGAAACGAAGGTGATTTTCCTTATATTATTAATGGAGTTCTGGTGAGTCGGAAGCCGTTGGTTCATGAATGTGGCCCCACATGTCAGTGTTTTCCTAACTGCAAAAATCGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACAAAGGATAAAGGTTGGGGTCTTCGATCATGGGATCCTATTCGTGCTGGTGCTTTTATTTGCGAGTATGCAGGAGAAGTTATTGATAAAGCTAGGTTAAGTCAGCTTGTACAAGAAGGTGATACTGATGAGTATGTTTTCGATACAACCCGTATTTATGAATCTTTCAAGTGGAATTATGAACCTAAGTTACTAGAAGAAGTGAGCACCAATGAGTCTAGTGAGGATTATGCTTTGCCACATCCTCTTATTATAAATGCTAAGAATGTTGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCTCCCAATGTTTTCTGGCAGCCTGTCTTATATGAAGAGAACAACCAATCCTTTCTCCATGTTGCATTTTTTGCATTGAGACATATTCCACCAATGCACGAGTTAACATATGATTATGGTTCTGACCGATCCGATCACACCGAGGGTAGCAGTGCACGCAAAGGTAGAAAGAAATGCTTATGTGGATCATCAAAATGCCGTGGTTCTTTTACTTGA 1986 0.4225 MEEGLGQHSVPPPGSIDKYKILDIKPIRSLIPVFSKNPQGQSSGQYPSGFSPFFPFGGPHETSTTGVKPRGRAMPTPLQAFRSPFGEDDDDDGFSNKRNAASRSSRVKLKKQKVYNDFHVDLSALVGISPGQRDNGNREVVNIVLMSFDALRRRLSQLVDAKELNTGLIKRTDLKAGNVCMTKGIRTNTAKRVGSVPGVEIGDIFFFRMEMCVIGLHAQSMGGIDALHIQSDRGEETLAVSIVSSGEYDDEADDGDVIIYTGQGGNFNKKDKHVSDQKLHKGNLALDRSSRTHNEVRVIRGIKDAVNPGAKIYVYDGLYKIQDSWVEKAKGGGGLFKYKLIRVPGQPSAFAVWKSVQKWKSGFPARTGLILADLSSGAESLPVSLVNEVDNVKSPAFFTYFHSLRHPKSFSLMQPSHGCSCSSKKACVPGDLDCSCIRRNEGDFPYIINGVLVSRKPLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDKGWGLRSWDPIRAGAFICEYAGEVIDKARLSQLVQEGDTDEYVFDTTRIYESFKWNYEPKLLEEVSTNESSEDYALPHPLIINAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFLHVAFFALRHIPPMHELTYDYGSDRSDHTEGSSARKGRKKCLCGSSKCRGSFT* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5324 661 ProSiteProfiles Post-SET domain profile. 645 661 IPR003616 -
Mal2g5324 661 Pfam Pre-SET motif 375 475 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g5324 661 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 660 - -
Mal2g5324 661 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 661 IPR025794 GO:0016571
Mal2g5324 661 Gene3D - 176 361 IPR036987 -
Mal2g5324 661 SUPERFAMILY SET domain 381 658 IPR046341 -
Mal2g5324 661 MobiDBLite consensus disorder prediction 628 661 - -
Mal2g5324 661 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 660 - -
Mal2g5324 661 Pfam SET domain 494 630 IPR001214 GO:0005515
Mal2g5324 661 SMART preset_2 371 467 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g5324 661 SMART G9a_1 189 346 IPR003105 -
Mal2g5324 661 ProSiteProfiles SET domain profile. 483 630 IPR001214 GO:0005515
Mal2g5324 661 Gene3D SET domain 364 660 IPR046341 -
Mal2g5324 661 SMART set_7 483 636 IPR001214 GO:0005515
Mal2g5324 661 MobiDBLite consensus disorder prediction 59 105 - -
Mal2g5324 661 SUPERFAMILY PUA domain-like 176 364 IPR015947 -
Mal2g5324 661 ProSiteProfiles Pre-SET domain profile. 417 480 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal2g5324 661 ProSiteProfiles YDG domain profile. 194 342 IPR003105 -
Mal2g5324 661 Pfam SAD/SRA domain 193 346 IPR003105 -
Mal2g5324 661 MobiDBLite consensus disorder prediction 628 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5324 Mal-Chr2 126928786 126930771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5324 6 660 Su(var)3-9 homologs AT1G73100 51.994 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal2g5324 SAD_SRA 5.5e-48 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5324 2 126928786 126930771 Mal5g1911 5 40781131 40783248 PCT