Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g4745 ATGGGTGCTATGTATGAAGAGCTAAGAAGAAACCAAGAAATGGATTCTTCAAGTATTATTCATTCAAAACAACACTATCAACAACAAAATTCTGGTTTACTAATGAGATACAATTCAGCTCCAACCTCATTATTTACAAACCTTATTGACAACAACACTCAAAACAATGGATGGAACAATATCAACAATGAAGAATCTCTTACAAATGAGAGTTATCTTCCATCTACAAGTTCAGAAATGGATACCATGTTATCCAAGTTAATATCATCCAACAATGGATGGAACAATTCTGAAGAACCTACGCAAGAGTTTGATGTCAAGCCTGTGAAGCAAGAAGTAGTTGCACAACAGAATGGTAATTACTCTTATGGTGGATCTGAGTTGATTTACCAAGGCTTTTCAAATGGTTCTGGTAATGGTTTTTATGGCCCTTTTGGTGGAGTTAACACTATGGATTCAGATGATTCCACTCAATCTAAAATTGGTGTTAGGAATTGTTCTAATCTCATTAGACAAAAGAGTTCACCTGCTGGATTATTCTCTAATGAAAATGGTCTTGCAACATTGACATTGAGAGAGGTAGAAAGCTTTAAAGCCAATGACATCTCAAATGGTACACTTAACTTCTCATCTAGGCCATCTACATGCTTGAAGAGAATGCCACAAATAGCTGAAAATGGAATCCAAAGCTTAGAGCCAAACTGTGACCAAACTACAAACCTAGTAAATGAAAATGGTAGCTCCAAATGTCACATTCCTAGCTTCACAAATGAATTTTGGGACAATTCTGCATTCAATGCACACAAAACAGAAAATGAAGATGAAATAATGTTTTCTAATTCAAATGGTTTGGAATCTCAAGAAGCAGATTTTTGCTATCAAATTCTTGGTTTGACTCATAATTTGATTCTTCCTAGTTCTTCGACTAAGATTACATCTATGGAGAAGTTTCTTCAAATTCAAGGTTCTGTTCCTTGTAAAATTCGAGCGAAAAGAGGCTTTGCAACTCATCCAAGAAGCATTGCAGAGAGGGTAAGAAGAGCAAGAATTAGTGACAGAATCAAGAAACTGCAAGGTCTTTTCCCAAAATCAGATAAGCAAACAAGCACAGCAGATATGCTGGATTTGGCAGTTGAGTACATTAAAGACCTACAAGAACAAGTTCAGATACTCACAGATTGTAAGGAAAAATGCAAATGTGCAAGTCATGAGAAGAAACACTGTAAACCTTGTAGCTGA 1239 0.3584 MGAMYEELRRNQEMDSSSIIHSKQHYQQQNSGLLMRYNSAPTSLFTNLIDNNTQNNGWNNINNEESLTNESYLPSTSSEMDTMLSKLISSNNGWNNSEEPTQEFDVKPVKQEVVAQQNGNYSYGGSELIYQGFSNGSGNGFYGPFGGVNTMDSDDSTQSKIGVRNCSNLIRQKSSPAGLFSNENGLATLTLREVESFKANDISNGTLNFSSRPSTCLKRMPQIAENGIQSLEPNCDQTTNLVNENGSSKCHIPSFTNEFWDNSAFNAHKTENEDEIMFSNSNGLESQEADFCYQILGLTHNLILPSSSTKITSMEKFLQIQGSVPCKIRAKRGFATHPRSIAERVRRARISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVQILTDCKEKCKCASHEKKHCKPCS* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g4745 412 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 334 384 IPR011598 GO:0046983
Mal2g4745 412 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 23 404 - -
Mal2g4745 412 CDD bHLH_AtbHLH_like 339 391 IPR045239 -
Mal2g4745 412 Gene3D - 336 409 IPR036638 GO:0046983
Mal2g4745 412 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 23 404 - -
Mal2g4745 412 Pfam Helix-loop-helix DNA-binding domain 340 385 IPR011598 GO:0046983
Mal2g4745 412 SMART finulus 340 390 IPR011598 GO:0046983
Mal2g4745 412 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 337 401 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g4745 Mal-Chr2 104227031 104230019 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal2g4745 HLH 1.2e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g4745 2 104227031 104230019 Mal5g1661 5 32693687 32703840 ECH
Mal2g4745 2 104227031 104230019 Mal2g4745 2 104227031 104230019 ECH