Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g2382 ATGGGTTTATCTTCTCTTCACGTCTGCAATATGGAATCATCCGCAGATCATTGGTTGCAGGGCACAATTCACGATGAGTCAGGAATGGATTCATCTTCACCAATGTCAGGTGACATGCTAACATGTTCAAGGCCATCATCCATGATAGAGAGGAGGCTAAGACCACCACATGACCTATCTCTAAAATGTCCAAGATGTGATTCAACTCACACCAAATTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACTTGTAGAAGGTATTGGACCAAAGGAGGTACTCTTAGAAACATCCCTGTTGGTGGTGGTTGTAGAAAAAACAAGAAAGTTTCTTCCAAAAAATCAAATGATCCTCACCATTTAGCTAATAATAATATTCAAAATCAACCACATCATGTACCTTCCTACCATCAAAACCCTAAAGATCTTCAACTTTCTTTCCCTGATGTGCAATTCTCCCACCTAAGTAACTTACTTGGAACTAATGGAGCATTAGGAAACCCTAATTTCATGGAGAATAAGTATGGTATGCTTGAAAACCCTAGGCCTATTGATTTCATGATGGAAAGTAAGTTAGAAGGTATAATTGGGAGTAGTTCTAGGAATTTTGATAATTTTTTTGGAAATAGTGATCACATGAGTATGAATATGAATATGGGTGTTGGGCTTGGAGTTGGAGGTGATCATATGAATATTGGTCAAAATGGTTTGCAACAGAATTTTCATCATGCATTTGGTGGAATGTCATCATTTGATGGAAACAATAACAATGGTGCTTATTTAATGGATTCTTGTCAAAGACTTATGCTTCCATATGATGCTAATGATGAGGATCATAATGCTTCAATTGATGTGAAGCCAAACCCTAAACTATTGTCACTTGAATGGCAGCAAGATCAAGGTTGCTCTGATGCTGGAAAAGAGTCATTTGGATATGGATCATGGAGTGGTATGATGAATGGTTATGGATCATCCACAACAAATCCTTTGATCAACGGCTGA 1020 0.3824 MGLSSLHVCNMESSADHWLQGTIHDESGMDSSSPMSGDMLTCSRPSSMIERRLRPPHDLSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDPHHLANNNIQNQPHHVPSYHQNPKDLQLSFPDVQFSHLSNLLGTNGALGNPNFMENKYGMLENPRPIDFMMESKLEGIIGSSSRNFDNFFGNSDHMSMNMNMGVGLGVGGDHMNIGQNGLQQNFHHAFGGMSSFDGNNNNGAYLMDSCQRLMLPYDANDEDHNASIDVKPNPKLLSLEWQQDQGCSDAGKESFGYGSWSGMMNGYGSSTTNPLING* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g2382 339 ProSitePatterns Zinc finger Dof-type signature. 63 99 IPR003851 GO:0003677|GO:0006355
Mal2g2382 339 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 329 IPR045174 GO:0003700|GO:0006355
Mal2g2382 339 Pfam Dof domain, zinc finger 60 115 IPR003851 GO:0003677|GO:0006355
Mal2g2382 339 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 17 329 - -
Mal2g2382 339 MobiDBLite consensus disorder prediction 110 144 - -
Mal2g2382 339 ProSiteProfiles Zinc finger Dof-type profile. 61 115 IPR003851 GO:0003677|GO:0006355
Mal2g2382 339 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g2382 Mal-Chr2 29821005 29822412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g2382 1 337 C2C2-Dof Transcription Factor Family AT5G62940 42.356 4.50e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal2g2382 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g2382 - - gmx:100806697 470.7