Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1843 ATGTTCCAAGAAAGACATAACAATATTAGTAGTAGCGAGCTAGATCAAATGTTGCATATGTTGTCTTCTCCTAATTCTAATCTCATGCCATTCCCAACAAGCTCAATGGACAAATCAAATTCAAAGTGGAAACCACACATTGAGACAGCTCCCAATTGTCCTCGTTGCGCTTCAGCAAACACCAAATTCTGTTACTACAATAATTACAGTTTGTCGCAGCCACGGTATTTCTGTAAAGGTTGTAGACGTTATTGGACTAAAGGTGGCTCTCTTCGGAATGTTCCTGTTGGCGGTGGCTGCCGTAAAAACCGACGTGGAAAGGCGGTCAGAAATTCTCAGAATGACCGCCTTTCTGCAAATTATGGCTCTGCTGATGATGATGATCATCAGCAGAACCAAAACAATGGTTCGCGCGATATAGATATGGCTGTTGTTTTTGCTAAATTCTTAAACCAAAATCCAAATAGTACTCATCATGGTGATGAGGAATTGGAAATTGAGAGTGAGGCTAATAATGGGTTGTCTTCTTCTTCCAACAATATTAACAATTTGTCGTCAACACCGGAAAGCGTTGAAACAGAGAATGATGCAGTGATCCAGCCCCAGAATCCTTTTGATGAGGTTCAGAATTATGGAGGGGAACATGAATTGAGTTTGAGTGGGATTGAATATGATCAATTTGAAGGATTTCTAGGTGTTGATGAAGATGTGGTACAAGATGTTCTATGGCCAGATTCTAATGCTATGAATATGATGATGTCATCTTCCAATAATTTTACATGGCAACAACCACCACCACCACCAATGATGCAAATGGAGTTACCAGGAGAGTTGGAATTGGAATACTCGATGCCATTGCCATTGAATGATCATAATGGTACTGTTAATTCAAATTCTACTAGTGTCAATTTAATAAGTGAAAGTTGGAGTACTTCTTGGGATTCTTTTGATCTTTCAACTATGGAAGTCTTCTCATCTAGTTCAAGACCTTAA 993 0.3927 MFQERHNNISSSELDQMLHMLSSPNSNLMPFPTSSMDKSNSKWKPHIETAPNCPRCASANTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKAVRNSQNDRLSANYGSADDDDHQQNQNNGSRDIDMAVVFAKFLNQNPNSTHHGDEELEIESEANNGLSSSSNNINNLSSTPESVETENDAVIQPQNPFDEVQNYGGEHELSLSGIEYDQFEGFLGVDEDVVQDVLWPDSNAMNMMMSSSNNFTWQQPPPPPMMQMELPGELELEYSMPLPLNDHNGTVNSNSTSVNLISESWSTSWDSFDLSTMEVFSSSSRP* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1843 330 MobiDBLite consensus disorder prediction 169 210 - -
Mal2g1843 330 MobiDBLite consensus disorder prediction 95 136 - -
Mal2g1843 330 Pfam Dof domain, zinc finger 51 105 IPR003851 GO:0003677|GO:0006355
Mal2g1843 330 ProSitePatterns Zinc finger Dof-type signature. 53 89 IPR003851 GO:0003677|GO:0006355
Mal2g1843 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 32 265 IPR045174 GO:0003700|GO:0006355
Mal2g1843 330 ProSiteProfiles Zinc finger Dof-type profile. 51 105 IPR003851 GO:0003677|GO:0006355
Mal2g1843 330 PANTHER DOF ZINC FINGER PROTEIN DOF1.2 32 265 - -
Mal2g1843 330 MobiDBLite consensus disorder prediction 169 207 - -
Mal2g1843 330 MobiDBLite consensus disorder prediction 112 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1843 Mal-Chr2 22246271 22247263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1843 43 155 C2C2-Dof Transcription Factor Family AT3G52440 60.169 1.73e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal2g1843 zf-Dof 1.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1843 - - mtr:MTR_3g090430 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1843 2 22246271 22247263 Mal2g1843 2 22246271 22247263 ECH