Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1758 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGATTTGTTAAACAAATGGATGGATCGAATTCAAATTCAAAACCACCTCCTTCTATTTTAGAGAGAAGAGCAAGACCACAAAAAGATCAAGCTTTGAATTGTCCAAGGTGCAATTCAACAAACACAAAATTCTGTTACTACAATAATTATAGTCTCTCTCAACCAAGGTACTTTTGCAAAACATGTAGAAGGTATTGGACCGAAGGTGGTTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAAAACAAAAGATCATCATCATCATCATCATCATCATCACCATCCATTTCACAATCACAACCTCCATCATCATCCATAACAAAAAATATTATCATTAATCCTGATCTACAGAATAATAATTTTCCTCAATCTGCTTCTCAAAACCCTAAGATCCATCAAGGACAAGATCTTAACCTAGCTTATCCACCACCAACAACTGAGGATAATTATAACACCATATCTAAATTTATTGAGCTTCCTTACACCACTGATCAAGACAAAACTACAAGTGCTATGGAGCTTCTGAAAACTGCTTCTTCATCAAGGGGTTTGAATTCTTTTATGCCTATGTCTTTGTCTGAGTCTAGTGCAATGTATAATTCAAGTGGTTTTGCTTTGCAAGATTTTAAGCTTGGGGTTAATTTTGGTTTAGAAGGGTTTGAGAATGGTGGTTATGGTGGTTTGCAAGGGATTAATAATAATCAAGAGGCTTCTGGTGGTGCAAGGATGTTGTTTCCTGTTGTAGAGGATCATCAGTTGAATAATAAGCAGCAACAAGTTCCAAATAGTGGTGAGTTTGAACATCAGCAGAATAGAAATCAAGGTGATTCTACTGGTTATTGGAATGGCATGTTAGGTGGAGGATCATGGTAG 912 0.3695 MDTAQWAQGNIGFVKQMDGSNSNSKPPPSILERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSSSSSSSSPSISQSQPPSSSITKNIIINPDLQNNNFPQSASQNPKIHQGQDLNLAYPPPTTEDNYNTISKFIELPYTTDQDKTTSAMELLKTASSSRGLNSFMPMSLSESSAMYNSSGFALQDFKLGVNFGLEGFENGGYGGLQGINNNQEASGGARMLFPVVEDHQLNNKQQQVPNSGEFEHQQNRNQGDSTGYWNGMLGGGSW* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1758 303 MobiDBLite consensus disorder prediction 274 293 - -
Mal2g1758 303 MobiDBLite consensus disorder prediction 84 158 - -
Mal2g1758 303 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 300 IPR045174 GO:0003700|GO:0006355
Mal2g1758 303 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Mal2g1758 303 MobiDBLite consensus disorder prediction 274 303 - -
Mal2g1758 303 MobiDBLite consensus disorder prediction 14 43 - -
Mal2g1758 303 Pfam Dof domain, zinc finger 40 97 IPR003851 GO:0003677|GO:0006355
Mal2g1758 303 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Mal2g1758 303 MobiDBLite consensus disorder prediction 92 158 - -
Mal2g1758 303 MobiDBLite consensus disorder prediction 14 28 - -
Mal2g1758 303 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1758 Mal-Chr2 21107483 21108788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1758 33 303 C2C2-Dof Transcription Factor Family AT3G61850 39.456 2.10e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mal2g1758 zf-Dof 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1758 - - cam:101493540 365.925