Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1733 ATGATGAAGGAAGAAGAGAATATTCATGAAGGATATAAAGGAAAAAATGTTGAAGACATGAATTGCTTAGATACAACATCTCAGAATTCAAGGAAGAAAAACAAGAAGATTGAAAACAAGAGAAGGTTTAGTGATGAACAGATAAGATCACTAGAATGCATATTTGAGTCAGAATCAAAGTTGGAACCAAGGAAGAAGATGCAACTTGCAAGAGATCTTGGTTTGCAACCTAGACAAGTTGCTATATGGTTTCAAAACAGAAGAGCAAGGTGGAAATCAAAAAGGATAGAGCAGGAATACAGAAAACTCAAAGATGAATATGACAATTTAGCTTCTAAGTTTCAGTGCCTTAAGGAAGAGAAAGAGTCTTTGCAATCAGAGGTTCAGAAGCTAAGTTATATGGTGGAAACATCTCATGATGGAGGAAGGGAAGCTAAGGAAAATAGCACAGAAGATGGTGGTTCAGGAAATGGATACAACAATTGCAGGGTTGAAACAAAGCAAAGGTTTTCAAATGAGGGTTTGGAGGATAAAGTGGTAATTTATTCAGATGATCAAAATGAAAGAAGCACAACATGGACAGAGAAAATTGAGGACAGAGGAAATCAACTTTTGAGAAATGATGATCATGAAGAAATTCCCTTGACAACAACATTTGAAAAATGGTACAATGTTGATCCATGTGGTATATTAGACCAATCATGCAATAGTTCTCAATGGTTGGATTTTTGGACTTAG 738 0.355 MMKEEENIHEGYKGKNVEDMNCLDTTSQNSRKKNKKIENKRRFSDEQIRSLECIFESESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIEQEYRKLKDEYDNLASKFQCLKEEKESLQSEVQKLSYMVETSHDGGREAKENSTEDGGSGNGYNNCRVETKQRFSNEGLEDKVVIYSDDQNERSTTWTEKIEDRGNQLLRNDDHEEIPLTTTFEKWYNVDPCGILDQSCNSSQWLDFWT* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1733 245 SUPERFAMILY Homeodomain-like 23 94 IPR009057 -
Mal2g1733 245 SMART HOX_1 37 98 IPR001356 GO:0003677
Mal2g1733 245 Coils Coil 86 134 - -
Mal2g1733 245 MobiDBLite consensus disorder prediction 137 161 - -
Mal2g1733 245 Pfam Homeodomain 40 92 IPR001356 GO:0003677
Mal2g1733 245 ProSiteProfiles 'Homeobox' domain profile. 34 94 IPR001356 GO:0003677
Mal2g1733 245 PRINTS Lambda-repressor HTH signature 74 90 IPR000047 GO:0003677
Mal2g1733 245 PRINTS Lambda-repressor HTH signature 65 74 IPR000047 GO:0003677
Mal2g1733 245 CDD homeodomain 40 95 IPR001356 GO:0003677
Mal2g1733 245 Pfam Homeobox associated leucine zipper 94 134 IPR003106 GO:0006355|GO:0043565
Mal2g1733 245 MobiDBLite consensus disorder prediction 1 41 - -
Mal2g1733 245 Gene3D - 37 99 - -
Mal2g1733 245 MobiDBLite consensus disorder prediction 1 17 - -
Mal2g1733 245 ProSitePatterns 'Homeobox' domain signature. 69 92 IPR017970 GO:0000981|GO:0006355
Mal2g1733 245 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 245 - -
Mal2g1733 245 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 2 245 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g1733 Mal-Chr2 20811189 20812076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g1733 26 245 Homeobox Transcription Factor Family AT2G46680 42.678 8.26e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal2g1733 Homeodomain 2.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g1733 K09338 - gmx:100499926 342.813