Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g1180 ATGGGTCCGAACAGATCACCATCTATGGCAGTGATCTTGATCCTGTTGATGTTCTTCACAGCAACATTTGCCTTGGACATGTCAATTATTTCCTATGACAAAACCCACGCAGACAAATCTTCGTGGCGTAGTGACGATGAGGTAATGAGTATTTACGAGGAGTGGCTCGTGAAACATGGAAAGCTCAATAACAACCTAGGAGAGAAGGATAAGAGATTTGAAATCTTCAAAGACAACCTCAAGTTCATCGACGAGCACAATGCCGAAAACCGGACATACAAGGTTGGGTTGAACCGGTTCGCTGATCTTAGTAACGAGGAGTACCGGTCTAGGTACTTGGGAACTAAGATTGACCCAATTGGAAGGATGATGGAAAGGACTAAGATCAGGAGCAATCGTTATGCTCCAAGTGTTGGTGACAAATTGCCTAATTCTGTTGATTGGAGGAAGCAAGGTGCTGTGGCCCAAGTCAAAGACCAAGGAAGTTGTGGGAGTTGCTGGGCTTTTTCAGCAATTGCTGCAGTGGAAGGGATTAACAAGATAGTCACAGGAGAGCTTGTTTCACTATCAGAACAAGAATTGGTTGACTGTGATAGAACAGTTAATGCAGGATGCGATGGCGGGCTTATGGAGTATGCCTTTGAATTCATCATAAACAATGGTGGTATCGACAGCGATGAGGATTATCCCTATCGTGGCGTTGATGGTATATGTGATCAATACAGGAAAAATGCTAGAGTTGTTACAATTGATGACTACGAACAGATTCCTGCCTATGATGAGTTAGCTTTGAAAAAGGCTGTTGCAAATCAGCCAATAAGCGTTGCCATTGAAGCAGGTGGTAGGGATTTCCAGTTATATGTATCAGGTATATTTACTGGAAGATGTGGGACATCATTAGACCATGGTGTTACTGCTGTTGGGTATGGAACAGAAAATGGAGTTGATTATTGGATAGTTAAGAACTCATGGGGTAAGAACTGGGGAGAATCAGGCTATGTAAGAATGGAACGTAATCTAGCGACAAACAGTGCAGGCAAATGTGGAATTGCTATGCAGTCTTCTTATCCTATAAAGAAGGGTCAAAATCCCCCAAATCCTGGACCATCTCCTCCTTCACCTTCGAACCCGCCATCTGTTTGTAGTAGGTACTACAGTTGTGCTTCTGGCACTACTTGTTGTTGTGTATTCGGATTTGGAAATTTTTGTTTTTCATGGGGATGTTGTCCTCTTGAGGCTGCAGTTTGCTGCAAAGATCACTCAAGTTGTTGTCCTCATGACTATCCCATTTGCAACACACACCAAGGAACCTGTCTGATGAGTAAGGATAACCCATTTGGAGTGAAGGCAATGAAGAGAACTCCAGCTAAACTGCACTGGCCTTTTGGTGGTCAGAGTAAGATAAACGCTGCTTAA 1416 0.4336 MGPNRSPSMAVILILLMFFTATFALDMSIISYDKTHADKSSWRSDDEVMSIYEEWLVKHGKLNNNLGEKDKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGRMMERTKIRSNRYAPSVGDKLPNSVDWRKQGAVAQVKDQGSCGSCWAFSAIAAVEGINKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGICDQYRKNARVVTIDDYEQIPAYDELALKKAVANQPISVAIEAGGRDFQLYVSGIFTGRCGTSLDHGVTAVGYGTENGVDYWIVKNSWGKNWGESGYVRMERNLATNSAGKCGIAMQSSYPIKKGQNPPNPGPSPPSPSNPPSVCSRYYSCASGTTCCCVFGFGNFCFSWGCCPLEAAVCCKDHSSCCPHDYPICNTHQGTCLMSKDNPFGVKAMKRTPAKLHWPFGGQSKINAA* 472
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal2g1180 471 Gene3D Granulin 380 446 IPR037277 -
Mal2g1180 471 Gene3D Cysteine proteinases 24 360 - -
Mal2g1180 471 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 32 387 - -
Mal2g1180 471 SMART pept_c1 142 358 IPR000668 GO:0006508|GO:0008234
Mal2g1180 471 CDD Peptidase_C1A 143 357 IPR039417 -
Mal2g1180 471 SMART GRAN_2 381 438 IPR000118 -
Mal2g1180 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 300 310 IPR025660 -
Mal2g1180 471 PANTHER CYSTEINE PROTEASE 32 387 - -
Mal2g1180 471 Pfam Granulin 392 439 IPR000118 -
Mal2g1180 471 Pfam Papain family cysteine protease 142 358 IPR000668 GO:0006508|GO:0008234
Mal2g1180 471 SUPERFAMILY Granulin repeat 378 412 - -
Mal2g1180 471 Pfam Cathepsin propeptide inhibitor domain (I29) 52 108 IPR013201 -
Mal2g1180 471 SMART Inhibitor_I29_2 52 108 IPR013201 -
Mal2g1180 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 160 171 IPR000169 -
Mal2g1180 471 PRINTS Papain cysteine protease (C1) family signature 160 175 IPR000668 GO:0006508|GO:0008234
Mal2g1180 471 PRINTS Papain cysteine protease (C1) family signature 302 312 IPR000668 GO:0006508|GO:0008234
Mal2g1180 471 PRINTS Papain cysteine protease (C1) family signature 317 323 IPR000668 GO:0006508|GO:0008234
Mal2g1180 471 SUPERFAMILY Cysteine proteinases 44 358 IPR038765 -
Mal2g1180 471 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 317 336 IPR025661 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal2g1180 Mal-Chr2 13820130 13826713 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g1180 2 13820130 13826713 Mal5g3633 5 103132775 103136496 ECH
Mal2g1180 2 13820130 13826713 Mal1g0483 1 5588406 5591202 ECH
Mal2g1180 2 13820130 13826713 Mal2g1180 2 13820130 13826713 ECH
Mal1g5735 1 134204098 134208554 Mal2g1180 2 13820130 13826713 PCT