Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal2g1180 | ATGGGTCCGAACAGATCACCATCTATGGCAGTGATCTTGATCCTGTTGATGTTCTTCACAGCAACATTTGCCTTGGACATGTCAATTATTTCCTATGACAAAACCCACGCAGACAAATCTTCGTGGCGTAGTGACGATGAGGTAATGAGTATTTACGAGGAGTGGCTCGTGAAACATGGAAAGCTCAATAACAACCTAGGAGAGAAGGATAAGAGATTTGAAATCTTCAAAGACAACCTCAAGTTCATCGACGAGCACAATGCCGAAAACCGGACATACAAGGTTGGGTTGAACCGGTTCGCTGATCTTAGTAACGAGGAGTACCGGTCTAGGTACTTGGGAACTAAGATTGACCCAATTGGAAGGATGATGGAAAGGACTAAGATCAGGAGCAATCGTTATGCTCCAAGTGTTGGTGACAAATTGCCTAATTCTGTTGATTGGAGGAAGCAAGGTGCTGTGGCCCAAGTCAAAGACCAAGGAAGTTGTGGGAGTTGCTGGGCTTTTTCAGCAATTGCTGCAGTGGAAGGGATTAACAAGATAGTCACAGGAGAGCTTGTTTCACTATCAGAACAAGAATTGGTTGACTGTGATAGAACAGTTAATGCAGGATGCGATGGCGGGCTTATGGAGTATGCCTTTGAATTCATCATAAACAATGGTGGTATCGACAGCGATGAGGATTATCCCTATCGTGGCGTTGATGGTATATGTGATCAATACAGGAAAAATGCTAGAGTTGTTACAATTGATGACTACGAACAGATTCCTGCCTATGATGAGTTAGCTTTGAAAAAGGCTGTTGCAAATCAGCCAATAAGCGTTGCCATTGAAGCAGGTGGTAGGGATTTCCAGTTATATGTATCAGGTATATTTACTGGAAGATGTGGGACATCATTAGACCATGGTGTTACTGCTGTTGGGTATGGAACAGAAAATGGAGTTGATTATTGGATAGTTAAGAACTCATGGGGTAAGAACTGGGGAGAATCAGGCTATGTAAGAATGGAACGTAATCTAGCGACAAACAGTGCAGGCAAATGTGGAATTGCTATGCAGTCTTCTTATCCTATAAAGAAGGGTCAAAATCCCCCAAATCCTGGACCATCTCCTCCTTCACCTTCGAACCCGCCATCTGTTTGTAGTAGGTACTACAGTTGTGCTTCTGGCACTACTTGTTGTTGTGTATTCGGATTTGGAAATTTTTGTTTTTCATGGGGATGTTGTCCTCTTGAGGCTGCAGTTTGCTGCAAAGATCACTCAAGTTGTTGTCCTCATGACTATCCCATTTGCAACACACACCAAGGAACCTGTCTGATGAGTAAGGATAACCCATTTGGAGTGAAGGCAATGAAGAGAACTCCAGCTAAACTGCACTGGCCTTTTGGTGGTCAGAGTAAGATAAACGCTGCTTAA | 1416 | 0.4336 | MGPNRSPSMAVILILLMFFTATFALDMSIISYDKTHADKSSWRSDDEVMSIYEEWLVKHGKLNNNLGEKDKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGRMMERTKIRSNRYAPSVGDKLPNSVDWRKQGAVAQVKDQGSCGSCWAFSAIAAVEGINKIVTGELVSLSEQELVDCDRTVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVDGICDQYRKNARVVTIDDYEQIPAYDELALKKAVANQPISVAIEAGGRDFQLYVSGIFTGRCGTSLDHGVTAVGYGTENGVDYWIVKNSWGKNWGESGYVRMERNLATNSAGKCGIAMQSSYPIKKGQNPPNPGPSPPSPSNPPSVCSRYYSCASGTTCCCVFGFGNFCFSWGCCPLEAAVCCKDHSSCCPHDYPICNTHQGTCLMSKDNPFGVKAMKRTPAKLHWPFGGQSKINAA* | 472 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal2g1180 | 471 | Gene3D | Granulin | 380 | 446 | IPR037277 | - | |
Mal2g1180 | 471 | Gene3D | Cysteine proteinases | 24 | 360 | - | - | |
Mal2g1180 | 471 | PANTHER | CYSTEINE PROTEASE FAMILY C1-RELATED | 32 | 387 | - | - | |
Mal2g1180 | 471 | SMART | pept_c1 | 142 | 358 | IPR000668 | GO:0006508|GO:0008234 | |
Mal2g1180 | 471 | CDD | Peptidase_C1A | 143 | 357 | IPR039417 | - | |
Mal2g1180 | 471 | SMART | GRAN_2 | 381 | 438 | IPR000118 | - | |
Mal2g1180 | 471 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases histidine active site. | 300 | 310 | IPR025660 | - | |
Mal2g1180 | 471 | PANTHER | CYSTEINE PROTEASE | 32 | 387 | - | - | |
Mal2g1180 | 471 | Pfam | Granulin | 392 | 439 | IPR000118 | - | |
Mal2g1180 | 471 | Pfam | Papain family cysteine protease | 142 | 358 | IPR000668 | GO:0006508|GO:0008234 | |
Mal2g1180 | 471 | SUPERFAMILY | Granulin repeat | 378 | 412 | - | - | |
Mal2g1180 | 471 | Pfam | Cathepsin propeptide inhibitor domain (I29) | 52 | 108 | IPR013201 | - | |
Mal2g1180 | 471 | SMART | Inhibitor_I29_2 | 52 | 108 | IPR013201 | - | |
Mal2g1180 | 471 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases cysteine active site. | 160 | 171 | IPR000169 | - | |
Mal2g1180 | 471 | PRINTS | Papain cysteine protease (C1) family signature | 160 | 175 | IPR000668 | GO:0006508|GO:0008234 | |
Mal2g1180 | 471 | PRINTS | Papain cysteine protease (C1) family signature | 302 | 312 | IPR000668 | GO:0006508|GO:0008234 | |
Mal2g1180 | 471 | PRINTS | Papain cysteine protease (C1) family signature | 317 | 323 | IPR000668 | GO:0006508|GO:0008234 | |
Mal2g1180 | 471 | SUPERFAMILY | Cysteine proteinases | 44 | 358 | IPR038765 | - | |
Mal2g1180 | 471 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases asparagine active site. | 317 | 336 | IPR025661 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal2g1180 | Mal-Chr2 | 13820130 | 13826713 | Dispersed/Wgd |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mal2g1180 | 2 | 13820130 | 13826713 | Mal5g3633 | 5 | 103132775 | 103136496 | ECH | |
Mal2g1180 | 2 | 13820130 | 13826713 | Mal1g0483 | 1 | 5588406 | 5591202 | ECH | |
Mal2g1180 | 2 | 13820130 | 13826713 | Mal2g1180 | 2 | 13820130 | 13826713 | ECH | |
Mal1g5735 | 1 | 134204098 | 134208554 | Mal2g1180 | 2 | 13820130 | 13826713 | PCT |