LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g0580	ATGGAGAGATTTTATAATAATAATAATAATAATAATAATAATTCTGAACAACAACGAGAAAGTATTCTGTTAGGGTATGAGGAGGAGAGTGGTAACAATCCGAGCACATCGCAGAGGGAATCAGACGTTGATTTTAACGACGTGTTTGGGGGACCACCGCGGCAGCGGTCATCGGTGAGTGGAGGAGAGGAAGGTGAAACGGGTTGGTGTAGTTGGCCACCACCGGAAAGTGAGATTGAGAGAGAGAAACCGGTGTTTGGTGAGGATAGTGGAGTAAGGAGGCGAAGAAAAGGAAAAGATTTCTTTGATGATATATTTGGAGGAGGAGAAGATTCTCAGTCTCAGACTCCGAGTGGCTGTTCAACACCAAAGAGACGTGACGCTGCTGCTTTCAGTCCTGCTCTTCAACCACTTGCTTCTTCTCTTCCTCCATCCTTCAGCCTTCCTGCCATATTGGCAAAAGGGGCAGACCTTCGAACATTTGGTTCCCCTCCTAGGAATCCACTCGAAATCGGTATTGCTTCTTCAAATGGATCAACCTTCTCAGATTCACATCTATCTAGATTTTCAGTCCAACATAAAGAGTTGCAAAATGATTTAAAGCCAACTTACAGGCAAAGTCTATTATCAAAGGAGTTTTCGAACTTGAGCCAATCTGATGAAGTAGACAAAGGAAACAATTTGAAACAAGACACATCTATTGCTGAAATTTCTCCTAATAATATCAGTAATGATAAGTTCCATTTCTCAATATACAAATGGGCAAGTAAAGGTGCAGTGCCTTTGGCAATGCCTTTTAGGACAGAGAGAACCTCAAGGACAAAAGATAAGTTTAAACTCGAGAAAAGCTCGAGCGCTAGGGAATGGATCGTCACTGACATTACCACTCAAAATGATAGTCCTAAGGAATGGATGGTCAGTGAGATTACTACTCAAAGTGATAGTCCTATAACATACAATGGTTCTTCTTTGATGAGAAATAAAAAACAAGATGTGTCAACTACTTCCGCAACCACTCAAAACAAGGTAGATTCACACCAGTCCGTAGAACATATCGTTTCTTCCAAACCTCAATCAGATTCATTGAGCAGCCATCAAACTCTTATTAAAGATATTCTTGGTAGTCCTATCACATACAATGCTAAAGCAGATTCAATTACTCAGTCTACAGATGAGACAGTCTTCAATGGAAAAACTGAAGCAGCAAGTGAAACTCATAAACATGAGTCCAAATCATTACATTCTCTGTTCAGTAAAAATAATATGAAACAAGATTATGATGAGATAACTAGAAAGGCGAGAGAAGAAAACATGGCGAAAAGCTCAAAGAAGTCGTCTTCTAGTTTTGATATTCCTATGAATCCAAAGAAGCAAGATGAAAAGCAAAACACAGTTTCCATGAGAGGTGCTGAATATAGCAAAGCTACTCCCCGAGGTTCATTAAGCCCAAGCAGAAGTATGGGAAAAGGCCGAGTTAAAGGAAAGGTCAAAGAATTTGCTCAAATATTCAATCAAGAAGCTGTAACAAAACCCAGAGTTGACTCAAAACCTCGACTTCAGGGTTATAAATACAAGCAGAAAGGAGCTGTAAGGGCAAATAATGATGTTGATGATGATCCTGAACAGTCCAAGAAGGAGATCCATACCGTAGAAGCCATTGATATGGCTGCCAAAAATTTGTCACAGCAGGATGATATCTCAGCATCAGCAGCAATTCCTGACATTTCATTTGCTGATATTGGAGATAAAGACGAGTCCTTCCATGAGAATTTCACGATCCAAGTATTATCCCAAGATGAGGATGAGGTCTCACAGAACCAAGAAATTCAAGTCCAAATCATTGACAAGAAGATACAACAATGGTCTAAAGGAAAGGAAGGAAACATACGCTCGCTGCTGTCAACATTACAAAACGTACTTTGGCCAAACTGTGGCTGGAAGCCTGTGCCTCTTGTTGATATAATTGAAGGGAATGCAGTTAAAAGATCTTATCAAAGAGCTTTACTCAGTCTGCATCCAGACAAGTTGCAGCAAAAGGGTGCTACTTCAGACCAAAAGTACACTGCAGAAAAAGTTTTTGATATTTTACAGGAGGCATGGACTCAATTCAATATGGTTGGTGCACTCTAA	2130	0.4014	MERFYNNNNNNNNNSEQQRESILLGYEEESGNNPSTSQRESDVDFNDVFGGPPRQRSSVSGGEEGETGWCSWPPPESEIEREKPVFGEDSGVRRRRKGKDFFDDIFGGGEDSQSQTPSGCSTPKRRDAAAFSPALQPLASSLPPSFSLPAILAKGADLRTFGSPPRNPLEIGIASSNGSTFSDSHLSRFSVQHKELQNDLKPTYRQSLLSKEFSNLSQSDEVDKGNNLKQDTSIAEISPNNISNDKFHFSIYKWASKGAVPLAMPFRTERTSRTKDKFKLEKSSSAREWIVTDITTQNDSPKEWMVSEITTQSDSPITYNGSSLMRNKKQDVSTTSATTQNKVDSHQSVEHIVSSKPQSDSLSSHQTLIKDILGSPITYNAKADSITQSTDETVFNGKTEAASETHKHESKSLHSLFSKNNMKQDYDEITRKAREENMAKSSKKSSSSFDIPMNPKKQDEKQNTVSMRGAEYSKATPRGSLSPSRSMGKGRVKGKVKEFAQIFNQEAVTKPRVDSKPRLQGYKYKQKGAVRANNDVDDDPEQSKKEIHTVEAIDMAAKNLSQQDDISASAAIPDISFADIGDKDESFHENFTIQVLSQDEDEVSQNQEIQVQIIDKKIQQWSKGKEGNIRSLLSTLQNVLWPNCGWKPVPLVDIIEGNAVKRSYQRALLSLHPDKLQQKGATSDQKYTAEKVFDILQEAWTQFNMVGAL*	710

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g0580	709	Coils	Coil	419	439	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	28	43	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	328	348	-	-
	Mal2g0580	709	Gene3D	DnaJ domain	605	708	IPR036869	-
	Mal2g0580	709	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	17	703	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	399	419	-	-
	Mal2g0580	709	SUPERFAMILY	Chaperone J-domain	606	703	IPR036869	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	1	21	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	1	128	-	-
	Mal2g0580	709	PANTHER	J DOMAIN-CONTAINING PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1	17	703	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	435	493	-	-
	Mal2g0580	709	MobiDBLite	consensus disorder prediction	76	106	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g0580	Mal-Chr2	6682495	6687614	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal2g0580	2	6682495	6687614	Mal2g0580	2	6682495	6687614	ECH
	Mal1g5938	1	137124240	137130473	Mal2g0580	2	6682495	6687614	PCT