Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0531 ATGATGTCAAACTCCATGACCCATCAAAATCAATTTGAGAACCAAGAACTACTAGGTGGTTATGTTTCATCTTCTTTGAGGAACAACAGTGCATATTTTCCAAACATTGAACTAGCTCAAGGTTCTGAGATGAGTCACACAAGACATCTAATGGATCTACTTGGTGCAGCAAACGAGAATAATCACCAAACACAACAAGGACTATCACTTTCTTTAGGCTCTCACATGCTTGTTGATCATGAATACAGAAACCGTTCCTTAAATCAAGGTGGTCTTATGATCAACCCAAGTTACTTCATGTCTGGTCAAGATCAGACACGTGAGCCTTGTAATCAACCTGTTGTGGAGAATCTAACAAGCGATTATTTTTACAGTGGTGGAAGTGGAAGTGGAACTTTTGCTTCGGGTTCTAATAACTCATTATTGAACCGTTCTACTTCTACTTCTTATGGAGGTGAGAATTTTGGTTCTGTTATTGGGAACTCTAGATACCTTAGACCAGTACAATCGCTTCTTGAAGATCTTGTTGATGTTGGTGGAAATGTGATTGATAGAATGAATGAAAAGTATGCTGAGAAATTGTTTCATGGGAGTAGAACAGGTGCTAGAACACTTTCCTCTGACCTCAAAGCAGAGTTGCGGATTCATGGACATTTATTGGCTGACAAACATGAACATCAGGTCAAAATTGCAAAGCTCATTGCATTGTTGGATGAGGTTGAGAGTAGATATGAGAAATATTACCATCAAATGGAAGAGGTAGTATCATCCTTTGAAATGATAGCAGGTTTAGGAGCTGCCAAATGTTACACTGCTTTAGCACTTCAGGCAATGTCTAGGCATTTTTGTAGCTTACGAGATGCCATAATGTCACAAATAAATGCTGAGAAAAGAAAACTGTTTCAGGATGTACCTAAAATCAATAGTGGATTGTCTCAACTGAGCTTATTTGAAAGAGATAACAATAATAATAATAGACAGAATAGAATGTCTCTCCAACAACTTGGAGTCATTCAAAACCAACGACAAGTTTGGAGACCTATTAGAGGGTTACCTGAAACCTCTGTAGCAATTCTTCGTGCTTGGCTTTTTGAGCACTTTCTTCACCCCTATCCTAATGATTCTGAGAAGTTAATGCTGGCTTCCCAAACAGGTTTAACTAAAAACCAAGTGTCAAATTGGTTCATAAATGCAAGGGTGCGGCTATGGAAACCAATGATAGAAGAAATGTACAAAGAAGAGTTTGGAGACTCTTCTGAAGACTCCAACCCGCCAGCTAACAATTTTATGTCAAGAGACGATGTCACGGATTGTGTGGAGGATTAG 1326 0.3876 MMSNSMTHQNQFENQELLGGYVSSSLRNNSAYFPNIELAQGSEMSHTRHLMDLLGAANENNHQTQQGLSLSLGSHMLVDHEYRNRSLNQGGLMINPSYFMSGQDQTREPCNQPVVENLTSDYFYSGGSGSGTFASGSNNSLLNRSTSTSYGGENFGSVIGNSRYLRPVQSLLEDLVDVGGNVIDRMNEKYAEKLFHGSRTGARTLSSDLKAELRIHGHLLADKHEHQVKIAKLIALLDEVESRYEKYYHQMEEVVSSFEMIAGLGAAKCYTALALQAMSRHFCSLRDAIMSQINAEKRKLFQDVPKINSGLSQLSLFERDNNNNNRQNRMSLQQLGVIQNQRQVWRPIRGLPETSVAILRAWLFEHFLHPYPNDSEKLMLASQTGLTKNQVSNWFINARVRLWKPMIEEMYKEEFGDSSEDSNPPANNFMSRDDVTDCVED* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0531 441 Gene3D - 340 420 - -
Mal2g0531 441 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 11 28 423 - -
Mal2g0531 441 SUPERFAMILY Homeodomain-like 351 413 IPR009057 -
Mal2g0531 441 SMART prehox3 153 291 IPR006563 -
Mal2g0531 441 CDD homeodomain 345 406 IPR001356 GO:0003677
Mal2g0531 441 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 423 - -
Mal2g0531 441 Coils Coil 223 250 - -
Mal2g0531 441 MobiDBLite consensus disorder prediction 414 441 - -
Mal2g0531 441 SMART HOX_1 345 409 IPR001356 GO:0003677
Mal2g0531 441 Pfam Associated with HOX 158 290 IPR006563 -
Mal2g0531 441 ProSiteProfiles 'Homeobox' domain profile. 364 405 IPR001356 GO:0003677
Mal2g0531 441 Pfam Homeobox KN domain 362 401 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0531 Mal-Chr2 6221333 6223780 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal2g0531 POX 4.2e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0531 2 6221333 6223780 Mal2g0531 2 6221333 6223780 ECH
Mal1g5961 1 137414624 137417553 Mal2g0531 2 6221333 6223780 PCT