Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0530 ATGTATCCCAATCAAGCATTCTCTTCAGGGTCCTATATGGATATGTTCACCTCGAGTCCTCTGTTACCTAACAATTACTACAATGAATCTGTTGCAGGACAAAATGAAGCCAAGTTTAACACGCCTATAGGTGACACAGTGACTATGCAATCCATTGATGAACACTCCAATGCTTGCAACTCTCATGTAAATGGTGAGCAAAATATACAACACCATGGGCTATCTCTTAGTCTTGGGACACTATTGCCTTCTACATCATCTGTTCCTCCATTTCACTATCAGTATCACGACACCGGTTTCGTATCCCTGATGAATGCTTGTCTTCCAAAGGGAACTGCTATATGTAATGATGATGATGATGATATTAACCTACATAAGGAGTTTAAAAGTTCTGAATGTATAGAAACTATTTCTTCTGGAGGCTTTCATGACATTACCAAAAGGGAAAGCTTTCACAACCCTCACCCTTCAGATCAATGCCTGCAGGGTTCATCAGGTTTTTCCAACATTTTCTTGAACTCCCAATATCATAAGGCTACGCATGAGTTACTTGATGAGATAGTTAATGTCCGAAAGCAACGTGGAATGGAAAAACAGGAAAAAATTCGCGACATTGGATTAGATAACTCCAAAGACAGTGATGGAAAATCTACTAGTCAATCTATGCAAATATCTCCAGGCCCTAGTGATCCTAATTCTAATCCTGGTTGTGAATTACCCCCAGCAGAAAGACAGAACTTGTTGAATAAGAAGACAAAACTTTTGTCCATGTTAGATGAGGTAGATAAAAGATACAAACAATACTGCCATCAAATGCAGATTGTGGTGTCATCTTTGGATATGGCTGCTGGGTGTGGAGCAGCAGAACCATATACCACACTTGCGTTGCGAACAATTTCGCGCCACTTTCGCTGCTTGCGTGACACAATCAGCAGCCAAATTCAAATGATTCAAAGGAACCTTGGGGAACAAGAAGGAATACCACGTCTCCGATATGTTGATCAACAGCTTAGACAACAAAAGGCACTTCAGCATCTTGGTGTTATGCGACAAGCTTGGAGGCCTCAGAGGGGACTTCCTGAAAATTCTGTTTCAATACTTCGTGCTTGGCTCTTTGAACATTTCCTTAATCCTTACCCCAAAGATTCAGAGAAAATAATGCTAGCTAGGCAAACTGGTTTGACAAGGAATCAGGTGGCAAATTGGTTCATCAATGCACGTGTGCGTCTTTGGAAACCAATGGTTGAGGAAATATACAAAGAAGAGTTTGGTGATTCTGAAATGAACTACAATCTTTCATCTGAAAATACACTCATCAAAGGTAAAAAATATTATGGTAAAGAGATTGATAATAATAATAATAATAATAATAATAATAATAATAAATCAGAAGAAGAGTCACAGGACAATGTACAAATTACTTGTGATAGTTTCACTGAAGAGCATGTAGAAAAAAATGAGATAGATTGTGGAAGTGGAAAATTGCATGGTAACCAAAGGTTCAGCGTAAAAAATGGCTTTTATTCACAAATAGATTCTGATACTGCCACATATGAATTATCAGAGTTGGGTAACTTTACAACTGTGGATGGTGGTGGCCACCACAATGTCTCTCTTGCATTGGAGTTGAGAAACTGTGAAAGCGATGGATTAGCCATATCTGATGATGCCATTCATAAAAGACATAATAATAATAATAATCAGACATTGGTTTCTTCTGATTTACTAGACTATCATTTCACAGATTCAGGAAAGCAACAACACATGTTTGGCAATACTCATCTGTTGCATGAGTTTGTCGTATGA 1806 0.3837 MYPNQAFSSGSYMDMFTSSPLLPNNYYNESVAGQNEAKFNTPIGDTVTMQSIDEHSNACNSHVNGEQNIQHHGLSLSLGTLLPSTSSVPPFHYQYHDTGFVSLMNACLPKGTAICNDDDDDINLHKEFKSSECIETISSGGFHDITKRESFHNPHPSDQCLQGSSGFSNIFLNSQYHKATHELLDEIVNVRKQRGMEKQEKIRDIGLDNSKDSDGKSTSQSMQISPGPSDPNSNPGCELPPAERQNLLNKKTKLLSMLDEVDKRYKQYCHQMQIVVSSLDMAAGCGAAEPYTTLALRTISRHFRCLRDTISSQIQMIQRNLGEQEGIPRLRYVDQQLRQQKALQHLGVMRQAWRPQRGLPENSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEIYKEEFGDSEMNYNLSSENTLIKGKKYYGKEIDNNNNNNNNNNNKSEEESQDNVQITCDSFTEEHVEKNEIDCGSGKLHGNQRFSVKNGFYSQIDSDTATYELSELGNFTTVDGGGHHNVSLALELRNCESDGLAISDDAIHKRHNNNNNQTLVSSDLLDYHFTDSGKQQHMFGNTHLLHEFVV* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0530 601 SMART HOX_1 353 417 IPR001356 GO:0003677
Mal2g0530 601 CDD homeodomain 353 414 IPR001356 GO:0003677
Mal2g0530 601 MobiDBLite consensus disorder prediction 212 232 - -
Mal2g0530 601 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 23 561 - -
Mal2g0530 601 Pfam Homeobox KN domain 370 409 IPR008422 GO:0003677|GO:0006355
Mal2g0530 601 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 23 561 - -
Mal2g0530 601 MobiDBLite consensus disorder prediction 194 242 - -
Mal2g0530 601 Pfam Associated with HOX 172 311 IPR006563 -
Mal2g0530 601 Gene3D - 350 427 - -
Mal2g0530 601 ProSiteProfiles 'Homeobox' domain profile. 350 413 IPR001356 GO:0003677
Mal2g0530 601 SUPERFAMILY Homeodomain-like 354 419 IPR009057 -
Mal2g0530 601 SMART prehox3 165 312 IPR006563 -
Mal2g0530 601 MobiDBLite consensus disorder prediction 194 211 - -
Mal2g0530 601 MobiDBLite consensus disorder prediction 449 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0530 Mal-Chr2 6214734 6216919 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal2g0530 POX 4.9e-45 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0530 2 6214734 6216919 Mal2g0530 2 6214734 6216919 ECH
Mal2g0530 2 6214734 6216919 Mal1g5961 1 137414624 137417553 PCT