Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6159 ATGTACTCCGCCGAGAAAAACCCTAACCCTAAAAATGTGTACCACATCGGAGGTCTTCCCGTCGAATTTCCATACCAACCCTACGGTTCTCAGTTTGCGTTTATGGGTCGAGTAATCTCAACCCTTAATCGAGCTCAGAATGAAGGTCACTGTCACGCTTTGCTCGAGTCCCCCACTGGTACCGGCAAATCCCTTTCGCTTCTTTGTTCCTCTCTCGCTTGGCAGCAACATTATAAACCTGCCACTCCGCCAACCGCCGATCCTCTCGCTTACGGTGGAGGATTTCTTCTCGATGACCTTTTACTTTCTTCCGCATCAGAAGCCACCAATAAGAAGCTGAAGAAAAAGCCAGTTCCAACTATTTATTATGCCTCGAGAACGCACTCACAAATTACTCAATTGGTTCGTGAATTGCGGAAAACTTCATACAGGGTGCCAATGGCTGTGTTGGCATCACGGAAGCATTACTGTACCAATAAAAATATATGTGGCAGAGAGAACATGGACGAAGAATGTAAACTACTTTTGAAAGATAAGATAATAGGATGTCCAGAGTTCAAAAATGTACAGAAAGTCAAAGCTCACCCTTCCCTTCAGAAAGGAGGATGCAATGAGGTGCATGACATAGAAGATCTTGTTAAAATTGGACAATCGGTGAAAGGTTGCTCTTATTATGCTGCCCGTTCCATGTCAGATGATGCACAATTGGTATTTTGTCCATATAACTACATCATTAATCCAGTCATTCGGGGAGCAATGGATGTGGATATTAAAGGAGCCATCGTGATATTTGATGAAGCTCACAATATAGAGGACATCAGTCGTGATGCTGGCAGTGTGGATATTGAAGAGGATATATTGGACAAACTACAAATGGAGCTCCAGCAACTCTGTCATTCAGATCCTGCAATTTACCAACCCCTGTATGAAATGACACAGGGCCTTACTAGCTGGATGGAACAGAAGAAAACTACACTGGAAAAACGTGACTTTCAGCACTATGTGTCATGTTGGACTGGCGATAAGGCTTTACAAGAGCTTGAAGAAGCAAATATTTCAAATCAGTGCTTCCCTATCTTGCTAGAATGTGCTACTAAGGCAATCAAAGTTTATACAGACTTGGAAACGGATGAACCACGTTTAAGTGGCATGTCAGTGATAACATTGGAAGGCTTATTCTCATCACTATCTTATTTCTTCTCAAAAAATGGATCTCACATGTTGGATTACCAGCTTGCTCTTCAGCGAAGTGTTATAAAACATGATAGAAGAGCTTCTGGAAACTGGACACACACTTTAAGTCTGTGGTGCTTGAATCCAGCAGTTGTATTTAGAGATGTTGCCGATCTTTCTTTATCAGTCATATTGACTTCTGGGACACTGTCACCAATGACATCGTTTTCTTCTGAACTTGGAGTTAAGTTTGAAAGTAGTCTTGAAGCTCCACATGTAATTGATATTGATTCACAGGTGTGGCCTGCTATAATCTCCACTGGTCCTGGTAATTATCCTTTGAATGCAAGTTACAAAACTGCTGATGGATATGCATTCCAGGATGCAGTTGGAAGATCTTTAGAGGAAATCTTCAAGATTGTTTCAGGTGGATGTCTTGTGTTCTTTCCAAGTTATAAATTGATGGAAAAATTATGCACCCGGTGGTCTGAAACAGGTCAATGGTCTCGACTCAATGCAGAAAAGTCCCTTTTTCTTGAATCAAAGGGGGGAAGCCAAGATGATTTTGAACTTACATTGAAGGGTTATTATGACTCAATTCATCATGACAAAAGACCTGCTTCTGGAAGGAAAAGAAGGATTAAGAAAACTGATCTAAATCACTTCCATGCAGTTGATTCCCTACAGGATTCTAAGAAAGGAGGGGCAGCTTTACTTGGTGTTTGTCGAGGAAAGGTTTCTGAAGGAATTGATTTCTCGGATGATAATGCCAGAGTAGTTATCATTGTTGGTATCCCATTTCCAAACATAAATGATATTCAAGTTGCACTAAAGAAGAAGTATAACGACACATTTAAATCATCTAAACAACTCATAGGCGGAAGTGAGTGGTACTGCCACCAAGCATTCCGAGCTTTAAATCAAGCAGCAGGGCGGTGTATACGACATAGACTTGATTATGGAGCAATCATCCTATTGGATGAACGATTTCGTGAAGAAAGGAATAAAGCATTTATTTCGAAGTGGTTAAGAAGACCCTTGAGAGTGTATGAAAGTTTTGATTTGTCGCTGGAGGGACTAAAATCATTCTTTGAGAATGCCAAGGAGCGGTATGGCATGGATACAGTGCATGCCACAAAGAATTTGGACTTAAATGGTGATGATGGTGTTCAAAACAAGGATGGAAATATGAAGTTTCCAAGGAAGAAAAATCAGAAACTGAACAAGTCTAGAACTGGAGCTGAGAAAGAGACGTCAGTTATTGGGGATAACATCTCTATTCCCACACCGAGTCCGAGCTCTCACAATCTTGGCGAAAGTCAGCCATCAGCTCAAAGGAATAGTAACACGTACAGTTTCAAAGACCATATTAACCTCCAATGCTGTAATCTGGCGGAAAGGTTCACTGAGGCATCGTCTGTGACATTTACACATGATGAAACCCCCATTGTCAAGGAAAGCCCATCTTTACATACTGGAAGTGATGCTGGCAGCGTCGATCACTCTAAAGATGACAATTCTGATTGCACCATAATTGAGGCTTCTGCTCAATTTGCAATGGATCGCTTGTCAAGTTTTCCAGTGTCTTCAACTACTGCAAGTAAAATATCAAACACAGTCACTCCTGAAAAGAGTGTAACTGCAAATAATATTCCAGAGTCATCTTTGAATTTGAGTGTTAATTCTCACAATCAGAAAAAGAGAAAGCCCACAGTCATACCATTTATAAACCTCATTGAAGAAGAAAACCATGACGCATCTTGTGTCAGCACTCCGACATGGTACACAAAAAGCTCAGTGGAAGTTAGAGAGGCAGCCCATGAAACTGAATGCAGTTTGGGGAGAATTTTAAACTCGCAATCTCCTCAGTTACCAACAATCAATTTACCTGGTTCATGTTCATTAACTATCCCTCTACTAGACAAAAGGTTACAGCTATTTTGTTCACTCTGCAAAAACCCATTGGGACGACATGAGAACCATCTATCTCTTACATGCTCTTTGATTTCATCATCAATAGTTCACTTGAGATTCCTTTTGAAAAAGAGAGTCGCAACATACACCGCTGATGCAGAAAAGAGTGTACCAGTTATTGTCACTGATTCTTCATTTGTTGATCAACGTATTTGCAATAGAATACCTAAAAGTACACATGAAGAAGGTATATGGTGTCCAGAAGATGGGTGTGTTTTCAGCACAATTTTTTGTCCCTTCTGCAGTAATACCAACAATTTGCTTGGAGTTCAGATCATGGCAACCAATTCTTCAAATGTTAAGTTACTTGACAAGGTAATGTTTTTCTTTGATTCTTTGGAAGTGAAAAACCACGAGGAAACAGGAAAAAGTGCTTCAGAGGAAGTGGGTTTTTCGCCAATTACCGACTCTGGCATGGATGGAGTTTCTGCCTTGAATTCCTTTGAGAAATATTCTTATGTTCCCCAACCAGGGAAATCAGAAGTTTGGAAGTCTAGAAAGTTAAAGCCAAGATTAAGAGGGTCGCTTTAA 3678 0.4059 MYSAEKNPNPKNVYHIGGLPVEFPYQPYGSQFAFMGRVISTLNRAQNEGHCHALLESPTGTGKSLSLLCSSLAWQQHYKPATPPTADPLAYGGGFLLDDLLLSSASEATNKKLKKKPVPTIYYASRTHSQITQLVRELRKTSYRVPMAVLASRKHYCTNKNICGRENMDEECKLLLKDKIIGCPEFKNVQKVKAHPSLQKGGCNEVHDIEDLVKIGQSVKGCSYYAARSMSDDAQLVFCPYNYIINPVIRGAMDVDIKGAIVIFDEAHNIEDISRDAGSVDIEEDILDKLQMELQQLCHSDPAIYQPLYEMTQGLTSWMEQKKTTLEKRDFQHYVSCWTGDKALQELEEANISNQCFPILLECATKAIKVYTDLETDEPRLSGMSVITLEGLFSSLSYFFSKNGSHMLDYQLALQRSVIKHDRRASGNWTHTLSLWCLNPAVVFRDVADLSLSVILTSGTLSPMTSFSSELGVKFESSLEAPHVIDIDSQVWPAIISTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFKIVSGGCLVFFPSYKLMEKLCTRWSETGQWSRLNAEKSLFLESKGGSQDDFELTLKGYYDSIHHDKRPASGRKRRIKKTDLNHFHAVDSLQDSKKGGAALLGVCRGKVSEGIDFSDDNARVVIIVGIPFPNINDIQVALKKKYNDTFKSSKQLIGGSEWYCHQAFRALNQAAGRCIRHRLDYGAIILLDERFREERNKAFISKWLRRPLRVYESFDLSLEGLKSFFENAKERYGMDTVHATKNLDLNGDDGVQNKDGNMKFPRKKNQKLNKSRTGAEKETSVIGDNISIPTPSPSSHNLGESQPSAQRNSNTYSFKDHINLQCCNLAERFTEASSVTFTHDETPIVKESPSLHTGSDAGSVDHSKDDNSDCTIIEASAQFAMDRLSSFPVSSTTASKISNTVTPEKSVTANNIPESSLNLSVNSHNQKKRKPTVIPFINLIEEENHDASCVSTPTWYTKSSVEVREAAHETECSLGRILNSQSPQLPTINLPGSCSLTIPLLDKRLQLFCSLCKNPLGRHENHLSLTCSLISSSIVHLRFLLKKRVATYTADAEKSVPVIVTDSSFVDQRICNRIPKSTHEEGIWCPEDGCVFSTIFCPFCSNTNNLLGVQIMATNSSNVKLLDKVMFFFDSLEVKNHEETGKSASEEVGFSPITDSGMDGVSALNSFEKYSYVPQPGKSEVWKSRKLKPRLRGSL* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6159 1225 MobiDBLite consensus disorder prediction 870 887 - -
Mal1g6159 1225 MobiDBLite consensus disorder prediction 870 897 - -
Mal1g6159 1225 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 17 337 IPR014013 GO:0005524
Mal1g6159 1225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 717 IPR027417 -
Mal1g6159 1225 Pfam DEAD_2 123 285 IPR010614 GO:0003677|GO:0003678|GO:0005524
Mal1g6159 1225 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 9 1103 IPR045028 -
Mal1g6159 1225 Pfam Helicase C-terminal domain 525 735 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Mal1g6159 1225 Gene3D - 502 746 IPR027417 -
Mal1g6159 1225 SMART deadxpd 19 305 IPR006554 GO:0003678|GO:0016818
Mal1g6159 1225 Gene3D - 27 325 IPR027417 -
Mal1g6159 1225 CDD SF2_C_XPD 489 721 - -
Mal1g6159 1225 MobiDBLite consensus disorder prediction 805 840 - -
Mal1g6159 1225 MobiDBLite consensus disorder prediction 774 840 - -
Mal1g6159 1225 PANTHER FANCONI ANEMIA GROUP J PROTEIN 9 1103 - -
Mal1g6159 1225 SMART Cxpdneu3 543 723 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6159 Mal-Chr1 140656009 140669943 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6159 1 140656009 140669943 Mal1g6159 1 140656009 140669943 ECH