Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6126 ATGGTTACCACTCCTAATAATCACTCTCCGACGAGTGCTCCGTCACCGGCGCAACCGTCTGGTGAAACTAATTTCATAAGAAAAACTCTTCCTTCACCGTGGGCTCAAGTCGTTCGCGGCGGTGCCGGCGATACCGAATCACAATCACCCACCGGAATTCATCAATCACTTCCGTCATCATCGTCGTCTTCCTCCTCTTCTCTCGCTACGGCCGACCAACCTCCTCCGCCGTCTGATGATTCACCAAAGGCAGTAGTGGTATCTTCTCTGCCTCCGGCGCCGGTGGAGAATTCGAGTACGATAGCCTCTGATGGTGGTGATGGTGGCAATGTAGGTGGTTCTAAGAAACCTGCATGGAACAAACCGTCTAATGGAATTGTTGTTGAAATTGGTCCTGTAATGGGTGCTGAATCATGGCCTGCTTTGTCTGAATCTGCTAAAATTCCTGGTAAATTGCCACCTGAATCGTCTTCTTCCAAGATTGCTCCTGTTGCTGCTGCTCCTGCTGTTGATGGATCATCACCTTCCACTTCTCAGGGGCCTATAATTCCAAACTCCCCTCAGAGACAAGGTGCTAGTAATGCGAAATCTAGTTCTGTGACAAACAATAATGTGCCCAATAGACCAAAACCTATGAGACGGCTAGGTGGCACCAACATTGGGTCTGGTCCTGCTCAGAGCAGCTTATCCAACCCTCCTACTCCTCCACCACTGCCTCACTTTCTTGCATATCAGCTCCATCCTGGCTATCGGAATATGGTGCCAAGTATCCCTGACTCTTCTCCAAGAGATCATCACCGGAACAATAACTGGGATGCAAGACCCTTAGTAGGGGGTTCTTCTCGCAGGGGTCATTTTGGGTCCCATCCACGAGGAGATGGTTCCTATCATCATAATAATTATAGTAGCAGGCGTGATCACGATCGTGGAAATTATGCGAATACTAGAGATGCTCACTCACCCCAGCCAAGGATGCCTCCCAGAGGAATATTGAGGCACCCACCACCTAGTACTGCTGCATTTTTGGGTCCTCAGCCCCTTGGACCTTTTCCAACCCCTGTTGCTGCTTATCCAGATTTCTATTACTTTCCAACAGTAACGTTGGATCCCTTTAGGGGGATGCCAGTCTTCCCCCACATGCCTTCTCCTGCAGCATTCTTCCCTGCTGCAGAATCTTCTTTGTCCAATGTGATAGTGAACCAGATTGATTATTACTTTAGTGATATTAATTTAGTCAATGATGAGTTTTTAAAGTCCAATATGGATGAAGAGGGTTGGGTTCCAATTACCTTGATAGCAAACTTCCCTCGAGTTAAAAATTTGACAACTAACATTCAGTTAATACTTGATTCGATGAGAAATTCAACGGTTGTGGAAGTCCAGGGTGACAAGTTGAGGAGGCGCAATGATAAGATGAATATTTTTATGCCATCTGCTCAGGTTCAGGCTGATTCTGGTTCAGTTTCACCTGTTGAATCAAGGGACAATAGCCTCACCGCTGATTTTCAAACTATCACTCTGGAAAAAACTAAAGATGAAGTTGAGTCTTCCCGTCAGTCTCAACTCCCAAATGGCAGTGATGTTGCCGGGAACACCAATTAA 1602 0.4682 MVTTPNNHSPTSAPSPAQPSGETNFIRKTLPSPWAQVVRGGAGDTESQSPTGIHQSLPSSSSSSSSSLATADQPPPPSDDSPKAVVVSSLPPAPVENSSTIASDGGDGGNVGGSKKPAWNKPSNGIVVEIGPVMGAESWPALSESAKIPGKLPPESSSSKIAPVAAAPAVDGSSPSTSQGPIIPNSPQRQGASNAKSSSVTNNNVPNRPKPMRRLGGTNIGSGPAQSSLSNPPTPPPLPHFLAYQLHPGYRNMVPSIPDSSPRDHHRNNNWDARPLVGGSSRRGHFGSHPRGDGSYHHNNYSSRRDHDRGNYANTRDAHSPQPRMPPRGILRHPPPSTAAFLGPQPLGPFPTPVAAYPDFYYFPTVTLDPFRGMPVFPHMPSPAAFFPAAESSLSNVIVNQIDYYFSDINLVNDEFLKSNMDEEGWVPITLIANFPRVKNLTTNIQLILDSMRNSTVVEVQGDKLRRRNDKMNIFMPSAQVQADSGSVSPVESRDNSLTADFQTITLEKTKDEVESSRQSQLPNGSDVAGNTN* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6126 533 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 42 74 - -
Mal1g6126 533 Pfam La domain 398 454 IPR006630 -
Mal1g6126 533 SMART la 392 470 IPR006630 -
Mal1g6126 533 MobiDBLite consensus disorder prediction 327 342 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 483 505 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 286 314 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 145 342 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 517 533 - -
Mal1g6126 533 Gene3D - 388 477 IPR036388 -
Mal1g6126 533 ProSiteProfiles La-type HTH domain profile. 388 478 IPR006630 -
Mal1g6126 533 PANTHER LUPUS LA PROTEIN-RELATED 34 520 IPR045180 -
Mal1g6126 533 CDD LAM 398 468 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 483 533 - -
Mal1g6126 533 SUPERFAMILY "Winged helix" DNA-binding domain 390 470 IPR036390 -
Mal1g6126 533 PANTHER LA-RELATED PROTEIN 1B 34 520 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 171 208 - -
Mal1g6126 533 MobiDBLite consensus disorder prediction 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6126 Mal-Chr1 140245908 140250451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6126 1 140245908 140250451 Mal1g6126 1 140245908 140250451 ECH
Mal1g6126 1 140245908 140250451 Mal2g0458 2 5187867 5190431 PCT