Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6062 ATGTCTGTTTCTTCTGTTACTGTTACCTCTACCGTGGGACCCTTTCTTCCACGATCCCATCGGCGATCAACGACAGCCGTCCGATCCAGCAAGGTGTCAGTTGGACCAACGAGATTATTAACGAAACTGAAACAAGACTGTGCCACTCCTCTACCTCTTCTTCAGCATGTAGCAGATACCATGTCTTCTGAAATGCGGGCCGGGCTTTCCTCCGATGATGGGCCTGGGCTTCCCATGATCCCCACTTATGTCCACACTCTTCCCACCGGGAATGAGAAAGGGCTGTTTTATGCATTGGATCTTGGAGGAACAAACTTTCGTGTGTTGAGGGTACAGTTAGGTGGCAAAGATGATCGTGTCATTGACGTTGAGTTTGATCAAGTTGCTATACCTCATGATCTCATGTTTGCTACATCTGAGGAGCTGTTTGATTTCATTGCTTTGGGGCTGGCCAAATTTGTGGACAAAGAGGATGGTAGATTTCAGTTTCCTCCAGGAAGAAAGAGAGAGATTGGTTTCACATTTTCATTTCCTGTGAAACAAACTTCTATTGACTCTGGCATACTTATCAAGTGGACCAAGGGTTTTGCTGTCTCTGGAACTGTAGGAAGAGATGTGGTTGCTTGTTTGAATGAGGCTTTGGAAAGACAACGACTAGATATGCGAGTTTCTGCTCTGGTTAATGATACTGTTGGAACACTAGCCGGAGCAGAATACTACGACAATGATGCTAAGGTTGCTGTTATTTTGGGAACCGGAACTAATGCTTGTTATATTGAGAACATAAGTGCCATTCCCAAATTACAAGGCCATGTTTCTTCTTCTGGTAAAATGATCATTAGTACTGAGTGGGGTGCTTTCTCAAATGGTCTCCCTCTAACTGTATTTGATAGAGAAATGGATACTGCTAGTATCAATCCTGGTCACCATATTTTTGAGAAGACAATCTCAGGAATGTATCTCGGTGAAATTGTGAGACGAGTGCTAGTCAATATGGCTGAAGAGGAAGGTTTGTTTGGAATATCTGTCCCTCAAAAACTGTCTACGCCTTTCATACTCGGGACCCCAGATCTAAGCGCCATGCAGCAGGATAATTCTGGCGATTTACAAGTCGTTGGATCTCTCCTCTATGATAAAGCAGGGGTTGAATCCAATCTAAGTGAAAGAAAAACAGTTCTAGAGGTTTGCGACACAATTGTAAAGCGAGGTGGTAGCTTAGCTGGTGCAGGAATTGTGGGGATTCTGCAAAAAATGGAAGAGGACTCGAAAGGTCTTATCTTTGGAAAGAGAAGTGTTGTTGCCATTGATGGGGGTTTGTATGAAAATTATCCTCAATACAGGACTTACTTGCAAGATTCGGTAAAGGAGCTATTAGGAACAGAAAAGTCGAACAATGTGGTCATAGAACATTCGAAAGATGGTTCTGGCATTGGAGGTGCTCTATTAGCAGCTTCAAATTCCATGTACATAGATTGA 1476 0.4336 MSVSSVTVTSTVGPFLPRSHRRSTTAVRSSKVSVGPTRLLTKLKQDCATPLPLLQHVADTMSSEMRAGLSSDDGPGLPMIPTYVHTLPTGNEKGLFYALDLGGTNFRVLRVQLGGKDDRVIDVEFDQVAIPHDLMFATSEELFDFIALGLAKFVDKEDGRFQFPPGRKREIGFTFSFPVKQTSIDSGILIKWTKGFAVSGTVGRDVVACLNEALERQRLDMRVSALVNDTVGTLAGAEYYDNDAKVAVILGTGTNACYIENISAIPKLQGHVSSSGKMIISTEWGAFSNGLPLTVFDREMDTASINPGHHIFEKTISGMYLGEIVRRVLVNMAEEEGLFGISVPQKLSTPFILGTPDLSAMQQDNSGDLQVVGSLLYDKAGVESNLSERKTVLEVCDTIVKRGGSLAGAGIVGILQKMEEDSKGLIFGKRSVVAIDGGLYENYPQYRTYLQDSVKELLGTEKSNNVVIEHSKDGSGIGGALLAASNSMYID* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6062 491 PRINTS Hexokinase family signature 97 113 - -
Mal1g6062 491 PRINTS Hexokinase family signature 171 196 - -
Mal1g6062 491 PRINTS Hexokinase family signature 246 260 - -
Mal1g6062 491 PRINTS Hexokinase family signature 223 239 - -
Mal1g6062 491 PRINTS Hexokinase family signature 469 485 - -
Mal1g6062 491 PRINTS Hexokinase family signature 392 414 - -
Mal1g6062 491 PRINTS Hexokinase family signature 310 332 - -
Mal1g6062 491 MobiDBLite consensus disorder prediction 1 30 - -
Mal1g6062 491 PANTHER HEXOKINASE 20 489 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Mal1g6062 491 Gene3D - 60 472 - -
Mal1g6062 491 Pfam Hexokinase 41 239 IPR022672 GO:0005524|GO:0005975|GO:0016773
Mal1g6062 491 SUPERFAMILY Actin-like ATPase domain 244 485 IPR043129 -
Mal1g6062 491 ProSitePatterns Hexokinase domain signature. 171 196 IPR019807 GO:0004396|GO:0005524|GO:0006096
Mal1g6062 491 CDD NBD_sugar-kinase_HSP70_actin 98 261 - -
Mal1g6062 491 Pfam Hexokinase 245 484 IPR022673 GO:0005524|GO:0005975|GO:0016773
Mal1g6062 491 ProSiteProfiles Hexokinase domain profile. 34 484 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Mal1g6062 491 PANTHER HEXOKINASE-LIKE 1 PROTEIN-RELATED 20 489 - -
Mal1g6062 491 Gene3D - 82 483 - -
Mal1g6062 491 SUPERFAMILY Actin-like ATPase domain 35 241 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6062 Mal-Chr1 138975259 138978922 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6062 1 138975259 138978922 Mal1g6062 1 138975259 138978922 ECH