Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6035 ATGGGAGTTCCAGCGTTCTATAGATGGCTTGCGGAGAAATATCCGATGGTGATTGTTGATGCTGTTGAAGAGGAACCGGTTGTTATCGAAGGTGTTCAAATCCCAATCGATACTAGTAAACCTAACCCTAACAATCTTGAATATGATAACCTTTACCTTGATATGAATGGTATTATTCATCCTTGTTTTCATCCTGAAGATAGGCCATCACCGACGTCTTTTGAGGAGGTGTTTGAGTGTATGTTTGATTACATTGATAGGCTGTTTAACATGGTGCGGCCTAGGAAGCTGCTCTTTATGGCTATTGATGGTGTTGCGCCGAGGGCTAAAATGAACCAGCAACGGTCTAGGCGGTTTAGGGCTGCTAAAGATGCATCTGATGCGGCTATTGAAGAATCAAGATTACGGGAGGAATTTGAGAGGGAGGGCAGAAAACTTCCTCCTAAAGAGGAATCGGCGACTTTTGATTCAAATGTCATCACACCTGGAACTGAATTCATGGCTGTTTTGTCAATTGCACTACAGTACTATATTCATCTTAGGCTGAACAATGATCCTGGTTGGAATAACATAAAGGTTATACTTTCTGATGCAAATGTTCCTGGTGAAGGGGAGCATAAGATTATGTCGTATATCCGCCTTCAAAGAAATCTTGAAGGATTCGATCCAAATACACGACATTGCCTGTATGGTTTGGATGCTGATTTGATTATGTTGGGTCTGGCTACCCATGAAGTCCATTTTTCAATTCTTAGAGAGGTTGTATTTACTCCTGGTCAAGACAAATGCTTCCTGTGTGGTCAAATGGGTCATATGGCTGCAGACTGTGAAGGAAAGGCTAAAAGGAAGTCAGGAGAATTTGATGAAAAAGGAGACGCTATTGTTGCTAAAAAGCCTTTCCAGTTTCTGAATATTTGGACTCTGAGGGAATATCTGGAGCATGAGATGAGAATACCTAATGCTCCTTTTGAGATTGATTTGGAATGCATATTGGATGATTTTATCTTCATATGCTTTTTCGTTGGCAATGATTTCCTACCACATATGCCTACACTTGAGATTCGCGAGGGTGCAATTAACTTGCTAATGACAGTATACAAGAAGGAACTTAAGGAAATGGGTGGTTATTTGACAAACGGTAGTAAGCCAAATTTGAGCAGAGTTGAGCATTTTATTCAGGCTGTTGGATCATATGAAGATAGCATATTCCAGAAAAGAGCTCGAATGCAACAGCGAACGGTGGAAAGAATAAAGCGTCAGAAGTCACAAGCAAGAAGAGGAGACGATGTTGGGCCTCAAGTTCAACCCGAGTCTCTAGTTGCAATTTCTAAATTCCATGGTTCTCGTCTTGCTTCAGCTCCAATACCTTCACCATTTCAACAATCTGGGCCCACCTCAGTTAGAAATGGCAATAAAGAAGTCCATGAGAGGCCCAGTAAAGTTTCTAAGTTATCTTCAGGAGCAACTGTTGCTGCTGCAATTGTTGAAGCTGAGAATAGTCTTGAAATAGATGTTGAAGATAACAAAGACGACTTGAAAATAAAGCTAAAGGGTATACTTCGTGACAAATCTGATGTGTTCAACTCAAAAGGTGGTCATGAGGACAAGATTAAGTTGGGAGAACCAGGCTGGAAAGAGAGGTATTACGAGGAAAAATTTTCTGCTCATACTCCTGAGGAACTTGATGCTATACGGAAAGATGTTGTCTTGAAATACACCGAGGGACTATGTTGGGTAATGCGTTATTATTACGAAGGTGTTTGTTCTTGGCAATGGTTTTATCCTTATCATTATGCCCCCTTTGCGTCTGATCTCAAGGGCCTTGGTGAACTTGATATTAACTTTGAGTTGGGTACTCCATTCAAACCATTTGATCAGCTTCTTGGAGTTTTTCCTGCTGCAAGCTCTCATGCCTTGCCTGAGCCGTATAGGAAACTTATGACTGATCCAACCTCGCCAATTATTGACTTTTATCCAATAGACTTTGAAGTGGACATGAATGGCAAACGCTATGCTTGGCAGGGTATTGCGAAGTTGCCTTTTATTGATGAAGCGCGTCTTCTTCAGGAAGTTCGGAAAGTAGAAAACTTGTTAACACCTGAGGAAAAGCGACGAAATGCAATAATGTTCGAGATGCTTTTTGTGAATTCATGTCATCCTCTCTCTGCGTGCATTAGTACACTTGACAACAAATGTAGAAACATGTCCAACTCTGAGCGTGCTGATGTCAAGGAAAAAATCGATCCCATTGAAAGTGGTGGAATGAATGGTTACATATCCTTATGTGGTGGAGAACCTTGCCCTCCCATCTTCAGGTCCCCTATTGCAGGCTTGGAAGACATCATGGATAATCATGTCATATGTGCAATATATAGACTTCCAGATGCACATGAACATATAGCTCGACCACCCCATGGAGTTAAATTTCCAAAGAAGACTGTGACGATTGGGGATCTAAAACCTGAACCTGTTCCATGGCATGAAGATAATGGGAGGAGATACAGCGAAAGTGGAAGGAAAAACCCACCGGGATCTATTTCTGGTCGGGAGCTTGGAGAGGCAGCACACAGACTCGTTGCCAATTCCTTACAGGTCAGGACGGACGGAAATAGATACCATCATCCTAATGGATCAACGATGCCTTATAATGGACCAAGGGGACATAGACAATCATGGCCTCGCAATAACTATGAATCGCGCCCAGGCTATAACTATGAATCACACCCAGGCTATGCTGCAATTCCACCGCCTTTATCAGCTCCTCCACAGTATGTGCCTTATGCTGCTGCTCCTATTGTGCAGTATGGTTATAACCAACCACCATACTCTCCACCTATAATACATAGTCCTCATCAACATTACTCAAATTCCTTTCCAAGAGGTGACCATCAAAACCCTAGATCACATCATTATGAAAGAAATAGCCATCATGTTAATGGCGGAAATGCAAGGCATTCCTCAGGGAACAATCAAAATCCCCGGTTTGCGAATACTCAAGGTTCATTTGCCCGTCAAAGCCAACATCACGACGCTGGTCGCCACAACCAAAACTTCCAAGCATATAGAGCTGACCAGCATTGGACTCCACGGGGTAACCCGAGTGGCCATAGGGAATATGGTCAACATTCGGCCAATCATTATTCTGTATTAGATAGAGGAGCAAGTAGGAAGCCAATGCCTCCACCCAGTCATAATCGCAAATAA 3204 0.4251 MGVPAFYRWLAEKYPMVIVDAVEEEPVVIEGVQIPIDTSKPNPNNLEYDNLYLDMNGIIHPCFHPEDRPSPTSFEEVFECMFDYIDRLFNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDASDAAIEESRLREEFEREGRKLPPKEESATFDSNVITPGTEFMAVLSIALQYYIHLRLNNDPGWNNIKVILSDANVPGEGEHKIMSYIRLQRNLEGFDPNTRHCLYGLDADLIMLGLATHEVHFSILREVVFTPGQDKCFLCGQMGHMAADCEGKAKRKSGEFDEKGDAIVAKKPFQFLNIWTLREYLEHEMRIPNAPFEIDLECILDDFIFICFFVGNDFLPHMPTLEIREGAINLLMTVYKKELKEMGGYLTNGSKPNLSRVEHFIQAVGSYEDSIFQKRARMQQRTVERIKRQKSQARRGDDVGPQVQPESLVAISKFHGSRLASAPIPSPFQQSGPTSVRNGNKEVHERPSKVSKLSSGATVAAAIVEAENSLEIDVEDNKDDLKIKLKGILRDKSDVFNSKGGHEDKIKLGEPGWKERYYEEKFSAHTPEELDAIRKDVVLKYTEGLCWVMRYYYEGVCSWQWFYPYHYAPFASDLKGLGELDINFELGTPFKPFDQLLGVFPAASSHALPEPYRKLMTDPTSPIIDFYPIDFEVDMNGKRYAWQGIAKLPFIDEARLLQEVRKVENLLTPEEKRRNAIMFEMLFVNSCHPLSACISTLDNKCRNMSNSERADVKEKIDPIESGGMNGYISLCGGEPCPPIFRSPIAGLEDIMDNHVICAIYRLPDAHEHIARPPHGVKFPKKTVTIGDLKPEPVPWHEDNGRRYSESGRKNPPGSISGRELGEAAHRLVANSLQVRTDGNRYHHPNGSTMPYNGPRGHRQSWPRNNYESRPGYNYESHPGYAAIPPPLSAPPQYVPYAAAPIVQYGYNQPPYSPPIIHSPHQHYSNSFPRGDHQNPRSHHYERNSHHVNGGNARHSSGNNQNPRFANTQGSFARQSQHHDAGRHNQNFQAYRADQHWTPRGNPSGHREYGQHSANHYSVLDRGASRKPMPPPSHNRK* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6035 1067 MobiDBLite consensus disorder prediction 414 435 - -
Mal1g6035 1067 Gene3D - 604 708 - -
Mal1g6035 1067 SMART c2hcfinal6 262 278 IPR001878 GO:0003676|GO:0008270
Mal1g6035 1067 Pfam Xrn1 helical domain 325 818 IPR041412 -
Mal1g6035 1067 CDD PIN_XRN1-2-like 51 312 - -
Mal1g6035 1067 Gene3D - 146 391 - -
Mal1g6035 1067 Gene3D - 1 136 - -
Mal1g6035 1067 MobiDBLite consensus disorder prediction 452 482 - -
Mal1g6035 1067 MobiDBLite consensus disorder prediction 943 1011 - -
Mal1g6035 1067 Pfam XRN 5'-3' exonuclease N-terminus 1 253 IPR004859 GO:0003676|GO:0004527
Mal1g6035 1067 MobiDBLite consensus disorder prediction 963 979 - -
Mal1g6035 1067 MobiDBLite consensus disorder prediction 454 469 - -
Mal1g6035 1067 Pfam Zinc knuckle 262 276 IPR001878 GO:0003676|GO:0008270
Mal1g6035 1067 PANTHER 5'->3' EXORIBONUCLEASE 1 1030 IPR027073 -
Mal1g6035 1067 MobiDBLite consensus disorder prediction 1025 1067 - -
Mal1g6035 1067 SUPERFAMILY Retrovirus zinc finger-like domains 258 283 IPR036875 GO:0003676|GO:0008270
Mal1g6035 1067 MobiDBLite consensus disorder prediction 868 900 - -
Mal1g6035 1067 PANTHER 5'-3' EXORIBONUCLEASE 1 1030 - -
Mal1g6035 1067 PIRSF Exonuclease_Xrn2 1 1049 IPR017151 GO:0004534|GO:0005634|GO:0006139
Mal1g6035 1067 MobiDBLite consensus disorder prediction 980 1011 - -
Mal1g6035 1067 ProSiteProfiles Zinc finger CCHC-type profile. 262 276 IPR001878 GO:0003676|GO:0008270
Mal1g6035 1067 MobiDBLite consensus disorder prediction 816 846 - -
Mal1g6035 1067 MobiDBLite consensus disorder prediction 822 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6035 Mal-Chr1 138581409 138590314 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6035 1 138581409 138590314 Mal1g6035 1 138581409 138590314 ECH