Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6033 ATGGATAGAAGGTGGCCTTGGAAGAAAAAATCTTCTGATAAGACTGTTCTTGACAAAGTTGCTGCTGAATTGGACTCTGCTGGTGCATCTAATCAGGTCAATCAGGATGTTTATAAGAAGCCGAACTATGTCCAAATATCTGTAGAGTCATACTCACATCTGACGGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAGGTTCAGACACTTGAGGATGAGATCAATGAATTAAATGAAAAACTGTCAGCAGCAAACTCAGAGATAAATACCAAGGAAGCCTTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCAGGTTGGGAAAAGGCGGAAGCAGAAGCTTTGGCGTTGAAAAACAGTCTTGAATCTGTCACTCTTTCGAAACTTACTGCTGAGGATCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACTGAAAATACAGGATATTTCCCTCGCAAAAACCAAGCAGTTGGACAGGATTAAGGGTGATCTTGAGGCTAGGATACGGAACTTTGAACAGGAACTCCTCAGGTCTGCTGCTGATAATGCGGCTCTGTCAAGGTCCTTGCAGGAGCGCTCTAACATGCTAGTGAAACTAAGTGAAGAAAAAGCTCATGCTGAGGCTGAAATTGAGCATCAAAAGAGCACCGTAGAATCATGTGAAAGGGAAATCAATTCACTTAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCGGAAGCTGCTAACAAGCAGCATATGGAGGGTGTCAAAAAAATTGCTAAATTAGAGGCAGAATGTCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCTGGTCCTGCTGCGCTCGCACAAATGAAGCTTGAAGTTGAAAGTCTTGGCCGAGATTATGGCGAAACTCGATTAAGGAAATCTCCTGTCAAACCTGCTAGTCCTCATTTCTCTCCGTTGCCTGATTTCTCCCTGGAGAATATACAGAAATTCCAGAAAGATAATGAATTCCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAGTTGCAGGCTTCAAGAAGTATGTGTGCTAAAACACTAAGCAAACTTCAAATTTTGGAAGCACAAGGCCAGACAAGTAATCAGCAGAAGGGATCTCCAAAATCTCCCATCCATATGAACCATGAAAGCATATACAGCCAAAATACAGGGTATGCAACAAGCATGATCTCCATTTCTGAAGATGGTAACGATGATGCAGGAAGTTGTGCCGAGTCTTGGTCTACAGCAATAATCTCTGAGCTATCCCAACTCCCAAAAGAAAAGAATGCTGATGAATTGGGCAAATCCGAAGCAACTAAAAAGTTAGAATTGATGGATGACTTCCTAGAGGTGGAGAAATTTGCTGGACTATCAAACGATTCTAATGAAGATGCCTCTGTGTCATCTACTTCAGACATTAAGACAGACGAAATCATGACCAATGGTGTATCAGAAGTCAGTACCAGCAAAGATGATATATCCGAGTCTGAAAAGAAGAGTGATATGAATCCATTGCCAAGCCAAGAGTCTCCTGCTGCAGGATCACCAGCACCCAGTCCTGGTGGGATTGATGGCTTTTCACCAGCAGATCTTCAATCAAGAATACTATCAGTGTTTGAGTCTATGGATAAGGATGCTGATGTGGGTAAGATCCTTAAGGATATTAAACATGTTCTTGAAGAAGTACATGATACTTCCATCCAAGACTCTGTAGCTGAAATTCCCCTCGATGTGACAGCTTCTGATACTCCATGTGATAAAAAGGATGATCCTGAAGATGCTGGTTCAGTTTCAGAAAAAGAACTTATTTCATCCCAAGAACCTTCTGAGTATTTGCAGATAACTTCTGATATAGAAGCTGCAATATCTCAAATTCACGACTTCGTATCGTTCCTAGGCAGAGAAGCAATGACAGTTCATGATTTATCTTCTGATGGAGATGGGATAAGCCAAAAGATGGAGGAGTTCTCCGTTACTTATAATAAAGTCAAATGCCATGAAGCAAGTTTGCTACAGTTTGTTCTTGATCTGGCTCATTTCTTGGCTAAAACAAGTGAGTTCAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCGGAAAATAAGTTAGTTCAAGACAATTCGTCGGGAGAGAGATATCAAAATGGTCATTCCCATACTCTTAATCCCTGCTCTAATCCTGAGGTTCCTGATGATGGAAATTTGACCACAAGTTATGAATCAAATGCCATGTCACAAAAGTTCTCCATGGAGGACTTTGAGGAATTGAGATTAGAGAAAGAGAAGGCAATCGTGGATCTGTCAAAATATTCTGAAAATCTTGAAATGACAAAATCTCAGTTACAAGAGACCGAGCAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAGGTCAAACAGCTTGTCTGAGACTCAACTCAAATGCATGGCAGAGTCATACAGATCACTCGAAACACGTGCACAGGAGTTTGAAACTGAGCTCAACCATCTACGAATGAAGACAGAAACTCTTGAGAATGAACTTAAAGATGAAAAGAGATCTCATGAAGCAGCTTTGGCGAAGTGCAAGGAGCTAGAAGAACAATTGCAAAGGAATGAGAGCTCGGCTGCTGATAATGAGCTTCAGACCAAAAAGGAGAGAGACTTGGCTTCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGCTAAAAGCTATGCATCCTCAAACAGAACCATTGGGATCTATATACGGTGAGAGGCTTTCAAAGGTTGAAGGCTTCACAGAACATCAACCTCAGAGCCCAAATTTGCAGGATCAGGTGGAGATAGACGGAGCTAGTTTTGCTTTTATGCAAAGACAGGGCACAGAGTCCCCTTTACATTTTACAAACACTTTATATAGTCCATCAGATAATGACTCAAACTTTCAAGCCATATCTCCTGTACACCATCAAAATCACAAGCCTACAAAGTCAACCTCTTCATCAGCTTCTTCCACTCCTACTCCAGAGAAACATGCCCGAGGTTTTAGTAGATTCTTTTCATCAAAAGGAAAAGCCGGTCATTGA 3246 0.411 MDRRWPWKKKSSDKTVLDKVAAELDSAGASNQVNQDVYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEINELNEKLSAANSEINTKEALVKQHAKVAEEAVSGWEKAEAEALALKNSLESVTLSKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQDISLAKTKQLDRIKGDLEARIRNFEQELLRSAADNAALSRSLQERSNMLVKLSEEKAHAEAEIEHQKSTVESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPASPHFSPLPDFSLENIQKFQKDNEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQILEAQGQTSNQQKGSPKSPIHMNHESIYSQNTGYATSMISISEDGNDDAGSCAESWSTAIISELSQLPKEKNADELGKSEATKKLELMDDFLEVEKFAGLSNDSNEDASVSSTSDIKTDEIMTNGVSEVSTSKDDISESEKKSDMNPLPSQESPAAGSPAPSPGGIDGFSPADLQSRILSVFESMDKDADVGKILKDIKHVLEEVHDTSIQDSVAEIPLDVTASDTPCDKKDDPEDAGSVSEKELISSQEPSEYLQITSDIEAAISQIHDFVSFLGREAMTVHDLSSDGDGISQKMEEFSVTYNKVKCHEASLLQFVLDLAHFLAKTSEFRFNILGYKGMETETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHTLNPCSNPEVPDDGNLTTSYESNAMSQKFSMEDFEELRLEKEKAIVDLSKYSENLEMTKSQLQETEQLLAEVKSQLASAQRSNSLSETQLKCMAESYRSLETRAQEFETELNHLRMKTETLENELKDEKRSHEAALAKCKELEEQLQRNESSAADNELQTKKERDLASAAEKLAECQETIYLLGKQLKAMHPQTEPLGSIYGERLSKVEGFTEHQPQSPNLQDQVEIDGASFAFMQRQGTESPLHFTNTLYSPSDNDSNFQAISPVHHQNHKPTKSTSSSASSTPTPEKHARGFSRFFSSKGKAGH* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6033 1081 Coils Coil 865 934 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 501 531 - -
Mal1g6033 1081 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1081 - -
Mal1g6033 1081 Coils Coil 349 376 - -
Mal1g6033 1081 Coils Coil 138 165 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 542 556 - -
Mal1g6033 1081 SUPERFAMILY Tropomyosin 822 965 - -
Mal1g6033 1081 Coils Coil 54 95 - -
Mal1g6033 1081 Pfam Filament-like plant protein, long coiled-coil 92 971 IPR008587 -
Mal1g6033 1081 Coils Coil 171 191 - -
Mal1g6033 1081 Coils Coil 809 857 - -
Mal1g6033 1081 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1081 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 501 569 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 620 640 - -
Mal1g6033 1081 Coils Coil 206 289 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 624 639 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 1025 1064 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 764 784 - -
Mal1g6033 1081 MobiDBLite consensus disorder prediction 1025 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6033 Mal-Chr1 138571214 138575538 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6033 1 138571214 138575538 Mal1g6033 1 138571214 138575538 ECH
Mal1g6033 1 138571214 138575538 Mal2g0496 2 5797883 5801941 PCT