Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6031 ATGGCTTCCTTAGAAGAAAAGGCTAAAAGTGTTGGAGTTGGTCAAACTCTTGTTGCTGAGATGAAATTGCTTAAGGAAATGCAAGAACATTGTGGAGTTAGAAAGACATTGAATTCAGAATTATGGCATGCTTGTGCTGGTCCTCTTGTGTCTTTGCCTCAAGTGGGAGGTCTTGTCTATTATTTCCCTCAAGGGCATAGTGAACAGGTTGCAGCTTCTACTAGAAGAACAGCTACCTCACAGATTCCAAACTATCCTAGTCTTCCATCTCAGTTGTTGTGTCAAGTTCAAAATGTCACACTGCATGCTGACAAGGAGACAGATGAAATCTATGCTCAAATGACTCTCCAACCATTGAATTCTGAAAAAGAAGTGTTTCCTGTATCTGAGTTTGGACTAAACAAAAGTAAACATCCAACCGAGTTTTTCTGCAAAACTTTGACTGCTAGTGATACTAGTACACATGGTGGATTTTCGGTTCCACGAAGAGCTGCGGAAAAGCTATTTCCTCCATTGGATTACGCAATTCAACCCCCAACTCAAGAACTTGTTGTTCGAGATTTGCATGATAATACATGGACATTTCGACATATATACCGAGGCCAGCCGAAGAGACATCTTCTCACAACGGGATGGAGCTTGTTTGTAGGCTCAAAAAGGCTTAGAGCAGGTGATTCTGTTCTTTTTATCAGGGATGAGAAATCACAATTGCGCGTTGGTGTAAGGCGTGCTAATCGTCAACAGACAACACTGCCATCATCAGTACTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCAGCTCATGCTGCTGCTAATCGAAGTCCATTTTCGATTTTCTACAATCCAAGGGCATGTCCTTCAGATTTTGTTATTCCACTGGCCAAATACAGAAAATCTGTTTATGGGACTCAGCTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACCGAGGAATCGGGTAAGCGCAGATATATGGGTACAATTGTCGGTATCAGTGATGTCGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGAAATATTCAGACTGAATGGGATGAGCCAGGGTGTGGTGATAAGCAAAATAGAGTTAGTGTTTGGGAGATCGAGACTCCTGAAAGCCTTTTCATATTTCCCTCTCTGACTTCGAGTCTAAAACGGCCGTTACAAACCGGATATTTGGAAAATGAGTGGGGAACTTTGTTACGAAGACCCTTTATTAAAGTACCCGAAAATGGAGGAACAATGGAGCTCTCAAACTCAATGCCAAATCTCTACCAAGAAAACATGATGAAGATGTTTTATAAACCACAAGTTATCAACAACAATGGAGCCTTTTTACCTGTCATGCAACAAGAATATGCTCCTACAAGAGTTCCCTTGCAAGATGTTAAGTCCACACAGGCAATAGAGAATCCGAAAGTTCATCATTCAAACACAGAGAGCATACCTAATAATAATACCTTAAACATGCATTCATTGTTGAAAAGTGATCAACCGGAAAAGATGCAGCCTTTGGCCAAAACCGATAATTCAAAATTAGAATCCGAGTTGTTACCTGATCATATGTTTGACTTCCCTTCATTCGAAAGCTGCAACAACATTGAAAAAGTGAATACGGCAAACCAATTAACATATCATAATCAATACCAAAACCAAAATCCATTACTCGCTCATGCTAGTCCATGGACTACGCAGCAGCCTCAGTTAGAATCATCAATGTCACATCCTCCACTGATTGACATGGTCCAACCTGATTCTTCTATTGTAAACGGCATACTTCCTCAGCTAGACGTCGAAGAATGGATGATGTATTCTCCTTGCCAGCCTCAAGTAGCGAATCCCTCTATACCTTCAATGAACCAAGAAGTGTGGGATAGTCATGTTAAGAATTTTAACTTGAGAGATCTTTCAGCTGAAAGCAATAACCAGAGTGAAATTTGTGTCAATGTTGATGTTAGTAATAGTGTGAGTACCACTATGGTTGATCCTTCTACTTCAAACACCATTTTCGACGACTTTTGCTCAATGAAGGATAAGGATTTTCAGCACCCTCAAGATTGCATGGTTGGTAACTTAAGCTCTAGTCAGGATGGCCAGTCTCAGATTACTTCCGTTAGTCTAGCTGAGTCGCACGCATTTTCTCTGCGAGACAACTCGGGTGGTACTTCTTCAAGCCATGTTGATTTTGATGAAAGTAGCTTTCTGCAGAATAATAACTCATGGAAGCAAGTAGCTGCACCAATCCGAACCTACACAAAGGTGCAAAAAGCAGGTTCTGTAGGAAGATCAATTGATGTAACTACTTTCAAGAACTATGAAGAGTTGATCCGCGCAATTGAATGCATGTTTGGACTGGACGGTCTGCTGAATGACACAAAAGGTTCCGGATGGAAATTAGTATATGTAGATTATGAGAGTGATGTTCTACTTGTTGGAGATGATCCTTGGGAGGAATTTGTGGGATGTGTCCGCTGCATAAGAATATTATCGCCTTCAGAAGTTAAAGAGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGAGCATTGCAAGGAATCAATGTTTGA 2580 0.412 MASLEEKAKSVGVGQTLVAEMKLLKEMQEHCGVRKTLNSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRTATSQIPNYPSLPSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEKEVFPVSEFGLNKSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYAIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFSIFYNPRACPSDFVIPLAKYRKSVYGTQLSVGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQTEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQTGYLENEWGTLLRRPFIKVPENGGTMELSNSMPNLYQENMMKMFYKPQVINNNGAFLPVMQQEYAPTRVPLQDVKSTQAIENPKVHHSNTESIPNNNTLNMHSLLKSDQPEKMQPLAKTDNSKLESELLPDHMFDFPSFESCNNIEKVNTANQLTYHNQYQNQNPLLAHASPWTTQQPQLESSMSHPPLIDMVQPDSSIVNGILPQLDVEEWMMYSPCQPQVANPSIPSMNQEVWDSHVKNFNLRDLSAESNNQSEICVNVDVSNSVSTTMVDPSTSNTIFDDFCSMKDKDFQHPQDCMVGNLSSSQDGQSQITSVSLAESHAFSLRDNSGGTSSSHVDFDESSFLQNNNSWKQVAAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMSEEGMKLLNSGALQGINV* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6031 859 SUPERFAMILY CAD & PB1 domains 754 832 - -
Mal1g6031 859 Pfam Auxin response factor 269 352 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mal1g6031 859 Gene3D - 307 379 - -
Mal1g6031 859 Gene3D - 749 842 - -
Mal1g6031 859 Gene3D - 140 244 IPR015300 -
Mal1g6031 859 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 857 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mal1g6031 859 ProSiteProfiles B3 DNA-binding domain profile. 143 245 IPR003340 GO:0003677
Mal1g6031 859 SUPERFAMILY DNA-binding pseudobarrel domain 133 272 IPR015300 -
Mal1g6031 859 Pfam B3 DNA binding domain 143 244 IPR003340 GO:0003677
Mal1g6031 859 PANTHER AUXIN RESPONSE FACTOR 5 24 857 - -
Mal1g6031 859 ProSiteProfiles PB1 domain profile. 753 837 IPR000270 GO:0005515
Mal1g6031 859 CDD B3_DNA 142 243 IPR003340 GO:0003677
Mal1g6031 859 Pfam AUX/IAA family 743 840 IPR033389 -
Mal1g6031 859 SMART B3_2 143 245 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6031 Mal-Chr1 138403255 138407585 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mal1g6031 AUX_IAA 2.2e-11 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6031 1 138403255 138407585 Mal1g6031 1 138403255 138407585 ECH