Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g6004 ATGGAACGTTTTGATCAAAAAAAAGTTCATGCATTTGGTTCTCCAAAACCCCCAATTCAATTGAATTCTATGCCTATTAATCAAATTAATCAAATGGGTTTTCCTGAAAATCACAAAAGTTCTGGTTTTGGTATACCACCTTCATACCCTAACGCTAATACCAGTTTGTCTCCTAAACCATCATCTCCTTTTCCCCAATTTATGCCTTCACAATCCCAAACCCATTCTAGGTCTTTGTCTCAACCCCCTTATTTTTCACTAGATTCCTTTTCCTTGCCACCGTTGAGTCCTTCCCCTTCCCCTTATCCTGTAAGTTCAAACCCCTTTTCGGAATCGGTTTCGAAAGATGTTTCTATGGAGGAAGGCGGCTTGGGTTTTGGTGCCACTCATGCACCTTCGCCTAACCGCGGTCCTGCTCTTCAGCATGGTCATTGTCTTCCCCCTCGTAAAGGGCATAGACGCTCGAGCAGTGATTCGCCTTTAGGGATATCGGAATTTGTTAACTCTGTACCTCAGTTGGTGAGTGGTGATCGTCGGAATTTGGTTTCTGGAGGAGAAAAATCTGGTTATGAGAAGCCAATTCAGTTGGTTTTGAAGGATAGGGACTGTGTTGATGGGTTTAGAGGAGATAGTTTCGATGGGAGGAAAGAGAGTGATGCAGCTGACGTGGATGATTTGTTTAATGCTTATATGAATTTGGAGAATATGAATAATATGAGTTTTTCGGGTATGGAAGATAGCAGAACCAGTGGTTCAAAGACGGTTGAAAGCAGTGATAATGAAGTTGAGAGTCATGTGAAAGGAATAAGTGCTAAGGGTGCGAGTTCAAGCTGTTCAGATGAGAGGAGGGAGGGAGTAAAGAGGAGTTCTAATGGAGATATTGCTCCCAGTGGCCGACATAGGAGAAGTTACTCACTGGATAGTTCCATTGGAAATTTTAATACTGAAGATTATAAGTTTACTCCTTTACAAAGTCGACCTGGTCAACACTCGCCTAGCAATTCAATGGATGGTTGTAAAACACCAGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCACAGGAGATCAAAAAAATAATGGAAAATGATAAACTTGCTGAAATTGCTGCGGCTGATCCCAAGCGTGCAAAGAGGATTTTGGCCAATCGTCTATCAGCTGCTCGCTCAAAGGAGCGGAAGATGCGATACATTTCTGAATTGGAGCACAAGGTTCAAACTCTTCAGACAGAGACTACTACACTGTCTACTCAGTTTACCAAATTACAGATGGATTATCAAGAGCTTAAAAGTGAGAATAACGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGCTCTGAATGAGACTTTGGATGCTGAAGTCCGGCGCTTAAGACGCACTGTAGCAGAACTAGGCGGAGAGTCTGTCCTCTCGAGTCTCATGGCTCGACAGCTTGCTCTTAACCAACAAATGCTCCAGTCACAGCATCAACATCCAAACCAGCTTAGAAATTTCCAGCCTCAAAACAGCCAATCTCAGGAAGAAACACAGACTCAGTCGCAGCAGCATATTCAACGCAATCATGAATTTCAATCGAAGCATCAGAATGGCAAAACTACTGCATAA 1629 0.4273 MERFDQKKVHAFGSPKPPIQLNSMPINQINQMGFPENHKSSGFGIPPSYPNANTSLSPKPSSPFPQFMPSQSQTHSRSLSQPPYFSLDSFSLPPLSPSPSPYPVSSNPFSESVSKDVSMEEGGLGFGATHAPSPNRGPALQHGHCLPPRKGHRRSSSDSPLGISEFVNSVPQLVSGDRRNLVSGGEKSGYEKPIQLVLKDRDCVDGFRGDSFDGRKESDAADVDDLFNAYMNLENMNNMSFSGMEDSRTSGSKTVESSDNEVESHVKGISAKGASSSCSDERREGVKRSSNGDIAPSGRHRRSYSLDSSIGNFNTEDYKFTPLQSRPGQHSPSNSMDGCKTPEISMEFGNGEFSSQEIKKIMENDKLAEIAAADPKRAKRILANRLSAARSKERKMRYISELEHKVQTLQTETTTLSTQFTKLQMDYQELKSENNEYKLRLQSLEQQSQLKDALNETLDAEVRRLRRTVAELGGESVLSSLMARQLALNQQMLQSQHQHPNQLRNFQPQNSQSQEETQTQSQQHIQRNHEFQSKHQNGKTTA* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g6004 542 Coils Coil 420 475 - -
Mal1g6004 542 MobiDBLite consensus disorder prediction 491 542 - -
Mal1g6004 542 MobiDBLite consensus disorder prediction 241 257 - -
Mal1g6004 542 MobiDBLite consensus disorder prediction 491 527 - -
Mal1g6004 542 CDD bZIP_plant_RF2 377 449 IPR044759 GO:0003700|GO:0006355
Mal1g6004 542 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 374 437 IPR004827 GO:0003700|GO:0006355
Mal1g6004 542 SUPERFAMILY Leucine zipper domain 376 432 IPR046347 GO:0003700|GO:0006355
Mal1g6004 542 MobiDBLite consensus disorder prediction 241 308 - -
Mal1g6004 542 PANTHER BZIP TRANSCRIPTION FACTOR 61 542 - -
Mal1g6004 542 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 61 542 - -
Mal1g6004 542 MobiDBLite consensus disorder prediction 44 93 - -
Mal1g6004 542 Gene3D - 373 437 - -
Mal1g6004 542 SMART brlzneu 372 436 IPR004827 GO:0003700|GO:0006355
Mal1g6004 542 MobiDBLite consensus disorder prediction 20 37 - -
Mal1g6004 542 MobiDBLite consensus disorder prediction 317 336 - -
Mal1g6004 542 Coils Coil 392 412 - -
Mal1g6004 542 Pfam bZIP transcription factor 376 434 IPR004827 GO:0003700|GO:0006355
Mal1g6004 542 MobiDBLite consensus disorder prediction 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g6004 Mal-Chr1 137985034 137988385 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g6004 bZIP_1 4.4e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g6004 1 137985034 137988385 Mal1g6004 1 137985034 137988385 ECH