Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5995 ATGACCACCACTTCCTATCTCCTCTTCCTTCTTCCAATTCTCATAACCACTACCGTCACCACCACCCCATCTCCGGTAGCCGCCGCCGGTAATGGTCAATGGCAAGTACTACAAAAAAGCATCGGCATTGTAGCCATGCACATGCAACTTCTTCACAACGATCACATTGTCATATTTGATCGTACTGATTTTGGCCTCTCCAACCTTTCTTTACCCAACGGAAAGTGTCGTCATGACCCCAAAGAAACCACCGTTAAAACTGATTGCACGGCTCATTCAGTCGAATATGACGTCAAATCCAACACTTTCCGTCCATTGTTTGTTCAAACTGACGTTTGGTGTTCCTCCGGTACAGTGAATCCTAAAGGAACACTTGTCCAAACCGGTGGCTACAACGATGGAGACCGAACCATTCGTATGTTTGATCCTTGTAACAACTGTGATTGGCGGGAATTTGACGGCGGACTTGCTGCTCGGAGATGGTATGCCACCAATCATATTCTGCCCGACGGCCGTCAGATTATCGTTGGTGGTAGAAAACAATTTAACTATGAATTTTATCCCAAAAACGGCATTGGTGCTAATGTATATAGGTTGCCGTTTTTGGCTCAGACTAATGAAGCTGGTGCAGAGAATAATTTGTATCCTTTTGTTTTTCTCAATGTGGATGGCAACCTCTTCATCTTTGCTAACAACAGAGCTATCCTCTTTGATTATACTAAGAATGTAGTGGTGAGAACATTTCCACAAGTGCCAGGTGGGGAACCTAGGAGTTATCCAAGCACAGGTTCAGGGGTATTATTGCCATTGAAGAATCTACAATCAAAGTCTTTAGAAGCTGAGGTTTTGATTTGTGGTGGAGCTCCTAAAGGATCTTATCAAAAAGCATCAAAGAATGAGTTTCTTGGAGCATTGAATACTTGTGCCCGAATCAAAATAACGGACCCGAATCCAACATGGGTTGTGGAGACCATGCCTAGGGCTAGAGTCATGGGTGACATGGTAATGCTCCCAAACGGCGACATTTTGATAATTAATGGAGCAGGCTCGGGGACAGCTGGATGGGAATTCGGGCGAAATCCAATTCTAAATCCGGTTCTTTACAAAACGAATAATCCAATCGGATCACGGTTTGAATTACAAAACCCATCTAGCACACCTCGAATGTATCATTCCAGTGCAATTTTAGTTCGTGATGGTAGGATTCTTGTTGGTGGTAGCAACCCTCACATTGGTTACAATTTTATCAATGCGTTGTTTCCAACTGAACTTAGTATTGAAGCTTTTTCTCCTTCTTACCTTGAATCTCGTTTCTCGAACGTTCGTCCGATGATCATGTCTTCTATTTTAGAATCACAAAAGCACGGTCAAAAGTTGGAGTTGCGGTTTCAAGTTAAAACAACATTGGATAAGAATTTGGTGTATGTTACGGTGTTGGCACCGCCTTTTAATACACATTCATTCTCCATGAATCAGAGGTTGTTGGTGTTGGAGTCAAACAAAGTGGATAATGTGGAAGGAACAACGTATGAAATTGAGGTTACTATGCCTGGTTCACCTATTATTGCACCTCCTGGTTATTATCTACTATTTGTGGTTCATAAAGGAATTCCTAGCGAAGGAATTTGGATACAAATACTTTGA 1644 0.424 MTTTSYLLFLLPILITTTVTTTPSPVAAAGNGQWQVLQKSIGIVAMHMQLLHNDHIVIFDRTDFGLSNLSLPNGKCRHDPKETTVKTDCTAHSVEYDVKSNTFRPLFVQTDVWCSSGTVNPKGTLVQTGGYNDGDRTIRMFDPCNNCDWREFDGGLAARRWYATNHILPDGRQIIVGGRKQFNYEFYPKNGIGANVYRLPFLAQTNEAGAENNLYPFVFLNVDGNLFIFANNRAILFDYTKNVVVRTFPQVPGGEPRSYPSTGSGVLLPLKNLQSKSLEAEVLICGGAPKGSYQKASKNEFLGALNTCARIKITDPNPTWVVETMPRARVMGDMVMLPNGDILIINGAGSGTAGWEFGRNPILNPVLYKTNNPIGSRFELQNPSSTPRMYHSSAILVRDGRILVGGSNPHIGYNFINALFPTELSIEAFSPSYLESRFSNVRPMIMSSILESQKHGQKLELRFQVKTTLDKNLVYVTVLAPPFNTHSFSMNQRLLVLESNKVDNVEGTTYEIEVTMPGSPIIAPPGYYLLFVVHKGIPSEGIWIQIL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5995 547 CDD E_set_GO_C 438 546 IPR015202 -
Mal1g5995 547 Gene3D - 28 438 IPR037293 -
Mal1g5995 547 Pfam Glyoxal oxidase N-terminus 46 287 IPR009880 -
Mal1g5995 547 PANTHER SECRETED PROTEIN-RELATED 26 546 - -
Mal1g5995 547 Pfam Galactose oxidase-like, Early set domain 442 546 IPR015202 -
Mal1g5995 547 SUPERFAMILY Galactose oxidase, central domain 94 435 IPR011043 -
Mal1g5995 547 SUPERFAMILY E set domains 438 546 IPR014756 -
Mal1g5995 547 Gene3D Immunoglobulins 441 547 IPR013783 -
Mal1g5995 547 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 26 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5995 Mal-Chr1 137925164 137927450 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5995 1 137925164 137927450 Mal1g5995 1 137925164 137927450 ECH
Mal1g5995 1 137925164 137927450 Mal2g0500 2 5838587 5840500 PCT