Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5988 ATGGATAATAACCAAGATTTGAGGTTGAAGAAGAAGAAGAGATCCAAACCTATTGAAATTGATTTTGATTCGGATAACGATGAGCCGATTGGTTCATTGTTTAAGATTAAGAGGAATAAGAAGAAGGTTAATTTTGTTGCATCAGAGGGTGGAATTAGGGAAAATGATAATTCTAGGGTTATGGATGATAATGAACCTTTGGCTAGCTTTAGGAAGAGATTGAAGGGTCCAAAGAGAGACCAGGGATCTGGTTTGAATGATGGTTTGGTTGGTGGTGGATCTGGGAGCGTTTCGAAGGACGAGAAACGGGTGGATTTGTTGGTTGGTGATGATGATATGCAGATGCGTCATTCTTCTGATCAGAATATGGAAGAAGAGTCGTTGTCGGTGATTTTCCATAAGGTGCAATCTAAGTCTGTTAAGAAATCGCGGGGAGCGTTAGGTTCGAAGAAGAAAAGAGGGAATCGGAATGTGGATAGTGGGTTGAAACATGGATGTGAAAGTTTAATAGAGAATGTAGATTTTGTGGTTGAAAGTAGATCTGGATCTGCTTCTGCGTTGAAATCGGTGGAGAAGAGTCAGGAATCAGATATGATTTGTTCGGTGTCTGCAATGGATGAACAAAAGGGTGGTGATGAATGTTTTCAAGAGGAAAAAGCGAAGGGTATTTGTGATGATTCAAACATTCCTGATGGATCGTCGGTTGATCACTCTAAATCAATTATCGTGTGCGATGGAGATAGGCAGCAATCGTCAAGTGTACAGGTTGAAGATGTTTGTGGTGCTTCTGACGAAAAGGTTGCATTGCAAGAAAAAATTAACGATAATAGTTTGAATCAGTGTTCGGACATGTTACGAGATGTTGAAATAATCGACATTGCTTCTCCCTCTAAAGCGGGGGAAGGGGTGTGTGAGTTTTCTGAGAGTGGAGAGCTCGAGAATAGATTGACTGATGCAATAGCAGAAGACCAGGTGTGTGATGGTGCTTCAGAAGGAGGTGTTTCTACTTCGACAGGGAAAGAAATTTTGTTAACTTGTCACACCGAGTCCTTGATCAAATCAAATGAAATTATATTGAATGAGAATAATGTCATGGTTTCTGGAAACAATTTCCAGGAATCCTCAATCAATGAAGGTATACAATTGGAGACGGAGATTGTTTCTGGTAGAAATTGCTATGATTGTAGTACTTCAGATACAAATGCTGAAGTACAAGATGTTGTTGTAGGCTGTTCACCTGAAAAACATGATGCAATCGCCAGTGGTAGATTATCCGCTATTGTGTCTAATAATGCCAACAAATCTGAATTGGTTGTCTCGTCAAATCACCCGGACAAACCTCTGGAAATGTGTGATATTCCAAAATACTCTACTGCTTCAATTCTGAAATGCAGCTCTATGTTAGATCCAACTCAATCTGATGGATCCTCTATACAATCTTCAATTCCAGAAGAAAATGGAAACACTGCAGAATATCATGCCTCTGTGTCTGATTTTGCTGACAATGGTGGTAAGATATCAGGCAATCCTCGTGCAACGCGAAAGACCAAAATGCATAAGCATGGCGACATGACTTACGAGGGGGATGCTGACTGGGAGATTTTAATAAATGATAAATCTCTAAATGAAAGCCAAGGTGGTGCAGATGGTGAACGTAGTCTTAGAACAAGAGTGAAGCAGGATTCCACTTTGAATGATGTTGAGGACTCTGAAAATGTTGCTGTAGCGGCAGTATCTGCTGGGCTGAAAGCTTGTGCAGTTTGTCCAATTGAGAAAATAAAATTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTAAAGGAATATTTAGATTGCAGGAATCAGATCTTAAGCTTTTGGAACAGTGATGTCACTCGTATTTTACCTCTTGCTGAATGTGGAGTTAGTGATGCCCGTTCTGAAAATGAAAGTCCTCGTTCTTCTCTTATTAGGGAGGTCTATGCATTTCTTGATCAATATGGTTATATAAATGTTGGAGTTGCCTCTCAAAAGGAGAATGTTGAGAGCAGTGCAAGACATTGTTATAAACTTGTTAAAGAAAAAGGATTCGAGGAAAGTTCTACAGCTTCATTGGCCGGCTCTGAAGATGGAGTTTCTTTTATTGTTGGTCAGACTAAAATGTCATATGCTTCTATGGATATTAACGATGGCCTAGTAAAGGATTTTGAAGACCTGACAACTGAAGCTACAGAAGGCATGATGCATGTTAATGAAGCAATGATGGATTCATCAAACATGGGACAGCGTGAAAGAAAAAATTATGATTACCAAGAAAATGTTGGGATTCAGGATGGCTTTCCCAATTGCAGATTGACTTCTCTTGTTGCTACAAAGCAAAACAATGAATCTAAATGTGTTACACATGCCTTAGGTGATCAGATAGGTGATACTCTGCAGTCTGATTTAGAGGATAGAAAGAGAGTGATTATCATTGGAGCTGGTCCTGCTGGGCTAACTGCTGCTCGCCACTTGAATCGTCAGGGCTTTACAGTAACTGTCCTTGAGGCTAGGAATAGAATAGGAGGTCGGGTATTTACAGATCACTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCCAGCATTATCACAGGTGTTGAGGCTGATGTGGCCACTGAGAGAAGACCAGATCCTTCCTCGTTGGTTTGTGCTCAGCTTGGCCTTGAATTGTCAGTGTTAAACAGTGACTGCCCTCTTTATGACATAGTAACTGGACAAAAAGTTCCTGCAGATATGGATGAAGCTTTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTACTGGTTGTTGCTCGGAAAGGTGAACAAGCAATGAAAATGTCTCTTGAAGACGGTTTAGAATACGCCCTTAAGGTTCGTCGCACGGGACACTCCGAAGGTAGTAAAGAAACTAAGCAAAGTAATACTGCAGATGATCCATTTGATTCCAAAAGAGATGGTGCTATGGAACAAAATTTTGATGAGGAGATTTTGGATCCTCAAGAGAGGAGGGTTATGGATTGGCACTTTGCTCATTTGGAGTATGGCTGTGCTGCTTTGCTTAAAGAAGTTTCTCTTCCCTATTGGAATCAAGACGATGTGTACGGAGGATTTGGTGGACCTCATTGTATGATCAAAGGAGGTTATAGCACTGTTGTTGAGTCTCTCGGAGAAGGGCTTGCTATTCACTTGAACCACGCCGTAACAAATGTGTCATATGGTATCAAGGAACCGGGCAAGAATAATAAAGTCAAAGTTTCTACATTGAATGGCAATGAGTTTTTTGGAGATGCTGTCCTCATTACTGTCCCACTTGGTTGTTTGAAGGCTGAAACTATACAGTTCTCCCCCTCTTTGCCGGAGTGGAAATGTTCTTCCATTCAGCGTCTTGGCTTTGGAGTTCTCAATAAAGTGATTTTGGAATTTCCTACTGTGTTTTGGGATGATGCGGTGGACTACTTTGGAGCAACAGCTGAGGAGAGAAGCAAAAGAGGTCACTGCTTTATGTTCTGGAATGTCAAGAAAACGGTCGGGGCTCCTGTCCTTATAGCATTGGTGGTTGGTAAGGCAGCCATAGATGGTCAAAGTTTAAGTTCTCCAGATCATGTCAACCATGCATTGAAGGTTCTTCGAAAACTTTTTGGGGAGGATTCCGTTCCTGATCCTGTTGCATATGTTGTGACCGATTGGGGAAGGGATCCCTATAGCTTTGGTGCATACTCTTATGTTGCTGTTGGAGCATCAGGAGAAGACTATGACATCATAGGAAGACCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCTGATACTGTTGGTGGTGCAATGATGAGCGGACTACGGGAGGCTGTTCGCATAATTGACATTTTGAACACCGGAATTGATAATACTGCAGAAGTAGAGGCATTGGAAGCTGCACAGGGACAGTTGGACACCGAAAGGAATGAAGTTAGGGATATAATAAAGAGACTTGATGCACTTGAACTTTCTAACATAATGTATAAGAACTCTTTTGAGGGTGCTAAAATCTTAACCCGGGAAGCTTTACTAAGGGAAATGTTCCTCAATGTGAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAATTGCTGAGTCTTCCTGTTGGAAACTTGAAGTCCTTTGCTGGAAGTAAAGAGGGGCTAACTGTTCTCAACTCCTGGATACTGGACTCAATGGGCAAGGATGGTACCCAACTCTTGAGGCATTGTTTGCGTCTTCTTGTGCGTGTATCAACTGATCTGGGTGCTGTACGCTTATCAGGAATGGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTAGAGCTATAGCTAGTCAATTGGTCAATGTATGGCTTGAAATTTTCCGTAAGGAAAAAGCTTCTAATGCGGGATTGAAGTTGTCAAGACAAGCAACTGCTGTAGAATTATCAAAGAGAAAATCTTTAAAAGAATCAGCTTCGGGAAAGCCTCCTCTGAGCACACATCAGGGCGCCGTTGAGAATAAAGGAGGCTTGCTGAATCCTGTGTCTGCTGGAAGCAATTCACCTTCCACCACACATGCGAAGAAATTGCACAGCAAACAAGGAAGACAACAATCAGCATGTGACTCAAGGCAGGAAGTCAGTTCTTCCAGGTCCCAAGGTTCAATAGACAAAATAGCTACCAAGGAGAAAACTAACCACCATGCTATGTCTGAAGAAGAAAAGGCTGCTTTAGCTGCTGCAGAAGCTGCTCGTACTAAAGCAATCGCTGCTGCTGAGGCATATGCCTCTGCAGAAGCTAGGTGCAGTACACTGTTACAGCTTCCAAAGATACCCTCATTCCATAAGTTTGCTAGACGGGAGCAATATTCACAAAACGATGAGTATGATAGTCGAAAAAAGTTGTCTGGTGGTTTTTTCGGAAGGCAAGATTGTGTTTCTGAGATTGATTCTAGGAATTGCAGAGTCAGGGACTGGTCTGTTGATTTTTCCACTGCTTGTGTTAATCTTGATAATTCTAATATACCAGTTGACAACCTCTCACAGAGGAGTCATTCTAATGAGATCGTCAGTCATTTGAATTTCGGAGAGCGCTCGGGAGAAAGTGCTGCCGTGGACAGCAATCTATATACAAAAGCTTGGATTGACACAGCTGGTGATGGGGTAGTAAAAGACCATCTTGCCATAGAGAGATGGCAATCTCAAGCAGCTGAAGCTGATTCTTATTTTTCTAATCCAACCAGTCATTTGAAGGATGAGGAGGACTCAAATGCCTATTCAAGTTTACCCAGCTGGAAGCATGAGGGTATAGCAAATGAGAGCTCTGTTTCCCAGGTTACTGTAAATAAGGAGACCCTTAAAGGTCATTCTCGAGGAGCAGATCATATTAAACAGGCTGTTGTTGACTATGTTGGATCATTACTTATGCCCCTGTATAAGGCTAGGAAGCTAGATAAGGATGGATACAAGGCAATAATGAAGAAAAGTGCAACAAAGGTCATGGAGCAAGCAACGGATGCAGAAAAAGCCATGACTGTTCGTGAGTTTCTAGATTTTAAGCGAAGGAATAAGATTCGTTCCTTTGTGGATGTATTGATTGAAAGACATATGGCAACAAAACCTGGTACAAAATCTTAA 5649 0.418 MDNNQDLRLKKKKRSKPIEIDFDSDNDEPIGSLFKIKRNKKKVNFVASEGGIRENDNSRVMDDNEPLASFRKRLKGPKRDQGSGLNDGLVGGGSGSVSKDEKRVDLLVGDDDMQMRHSSDQNMEEESLSVIFHKVQSKSVKKSRGALGSKKKRGNRNVDSGLKHGCESLIENVDFVVESRSGSASALKSVEKSQESDMICSVSAMDEQKGGDECFQEEKAKGICDDSNIPDGSSVDHSKSIIVCDGDRQQSSSVQVEDVCGASDEKVALQEKINDNSLNQCSDMLRDVEIIDIASPSKAGEGVCEFSESGELENRLTDAIAEDQVCDGASEGGVSTSTGKEILLTCHTESLIKSNEIILNENNVMVSGNNFQESSINEGIQLETEIVSGRNCYDCSTSDTNAEVQDVVVGCSPEKHDAIASGRLSAIVSNNANKSELVVSSNHPDKPLEMCDIPKYSTASILKCSSMLDPTQSDGSSIQSSIPEENGNTAEYHASVSDFADNGGKISGNPRATRKTKMHKHGDMTYEGDADWEILINDKSLNESQGGADGERSLRTRVKQDSTLNDVEDSENVAVAAVSAGLKACAVCPIEKIKFKEILKRKGGLKEYLDCRNQILSFWNSDVTRILPLAECGVSDARSENESPRSSLIREVYAFLDQYGYINVGVASQKENVESSARHCYKLVKEKGFEESSTASLAGSEDGVSFIVGQTKMSYASMDINDGLVKDFEDLTTEATEGMMHVNEAMMDSSNMGQRERKNYDYQENVGIQDGFPNCRLTSLVATKQNNESKCVTHALGDQIGDTLQSDLEDRKRVIIIGAGPAGLTAARHLNRQGFTVTVLEARNRIGGRVFTDHSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELSVLNSDCPLYDIVTGQKVPADMDEALEAEYNSLLDDMVLVVARKGEQAMKMSLEDGLEYALKVRRTGHSEGSKETKQSNTADDPFDSKRDGAMEQNFDEEILDPQERRVMDWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGPHCMIKGGYSTVVESLGEGLAIHLNHAVTNVSYGIKEPGKNNKVKVSTLNGNEFFGDAVLITVPLGCLKAETIQFSPSLPEWKCSSIQRLGFGVLNKVILEFPTVFWDDAVDYFGATAEERSKRGHCFMFWNVKKTVGAPVLIALVVGKAAIDGQSLSSPDHVNHALKVLRKLFGEDSVPDPVAYVVTDWGRDPYSFGAYSYVAVGASGEDYDIIGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGIDNTAEVEALEAAQGQLDTERNEVRDIIKRLDALELSNIMYKNSFEGAKILTREALLREMFLNVKTNAGRLHVAKQLLSLPVGNLKSFAGSKEGLTVLNSWILDSMGKDGTQLLRHCLRLLVRVSTDLGAVRLSGMGKTVKEKVCVHTSRDIRAIASQLVNVWLEIFRKEKASNAGLKLSRQATAVELSKRKSLKESASGKPPLSTHQGAVENKGGLLNPVSAGSNSPSTTHAKKLHSKQGRQQSACDSRQEVSSSRSQGSIDKIATKEKTNHHAMSEEEKAALAAAEAARTKAIAAAEAYASAEARCSTLLQLPKIPSFHKFARREQYSQNDEYDSRKKLSGGFFGRQDCVSEIDSRNCRVRDWSVDFSTACVNLDNSNIPVDNLSQRSHSNEIVSHLNFGERSGESAAVDSNLYTKAWIDTAGDGVVKDHLAIERWQSQAAEADSYFSNPTSHLKDEEDSNAYSSLPSWKHEGIANESSVSQVTVNKETLKGHSRGADHIKQAVVDYVGSLLMPLYKARKLDKDGYKAIMKKSATKVMEQATDAEKAMTVREFLDFKRRNKIRSFVDVLIERHMATKPGTKS* 1883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5988 1882 MobiDBLite consensus disorder prediction 141 160 - -
Mal1g5988 1882 SUPERFAMILY FAD-linked reductases, C-terminal domain 1130 1241 - -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 55 80 - -
Mal1g5988 1882 SUPERFAMILY Homeodomain-like 571 668 IPR009057 -
Mal1g5988 1882 Pfam SWIRM domain 586 663 IPR007526 GO:0005515
Mal1g5988 1882 ProSiteProfiles SWIRM domain profile. 573 673 IPR007526 GO:0005515
Mal1g5988 1882 MobiDBLite consensus disorder prediction 1488 1581 - -
Mal1g5988 1882 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 508 1878 - -
Mal1g5988 1882 Gene3D - 572 678 IPR036388 -
Mal1g5988 1882 PANTHER FLAVIN MONOAMINE OXIDASE 508 1878 - -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 498 522 - -
Mal1g5988 1882 Coils Coil 1308 1335 - -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 54 102 - -
Mal1g5988 1882 Gene3D - 920 1247 - -
Mal1g5988 1882 Gene3D - 814 1290 IPR036188 -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 1561 1581 - -
Mal1g5988 1882 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1390 1472 IPR035441 -
Mal1g5988 1882 SUPERFAMILY FAD/NAD(P)-binding domain 811 1295 IPR036188 -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 960 986 - -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 1517 1560 - -
Mal1g5988 1882 MobiDBLite consensus disorder prediction 1 29 - -
Mal1g5988 1882 Pfam Flavin containing amine oxidoreductase 822 1292 IPR002937 GO:0016491
Mal1g5988 1882 PRINTS Adrenodoxin reductase family signature 836 849 - -
Mal1g5988 1882 PRINTS Adrenodoxin reductase family signature 813 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5988 Mal-Chr1 137839856 137848740 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Mal1g5988 Amino_oxidase 1.5e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5988 1 137839856 137848740 Mal1g5988 1 137839856 137848740 ECH