Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5964 ATGGCAGCAGAAGAAGGACAAGTGATCGGTGTTCATACCGTTGAACAGTGGAAGGATGAGATCCAAAAGGGAAACGACTCCAAAAAACTGATTGTGGTGGATTTTACTGCTTCATGGTGTGGTCCATGCCGTTTTATTGCTCCAATTCTAGCTGAGATTGCTAAGAAGACACCTGAAGTCATCTTCCTTAAGGTGGATATTGATGAATTAAAGACTGTTGCTGAGGAATGGTCTGTTGAGGCTATGCCAACTTTCTTGTTCTTGAAAGAAGGTAAGGAAGTGGATAAGGTAGTTGGTGCTAGGAAGGAAGAGCTGGAAAATGCAATAGCCAAGCATAAGAATGCAACTGTTGCTACTGCTTGA 363 0.427 MAAEEGQVIGVHTVEQWKDEIQKGNDSKKLIVVDFTASWCGPCRFIAPILAEIAKKTPEVIFLKVDIDELKTVAEEWSVEAMPTFLFLKEGKEVDKVVGARKEELENAIAKHKNATVATA* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5964 120 PANTHER THIOREDOXIN 1 113 - -
Mal1g5964 120 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Mal1g5964 120 SUPERFAMILY Thioredoxin-like 5 114 IPR036249 -
Mal1g5964 120 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Mal1g5964 120 PANTHER THIOREDOXIN 1 113 - -
Mal1g5964 120 Pfam Thioredoxin 11 110 IPR013766 -
Mal1g5964 120 PRINTS Thioredoxin family signature 78 89 - -
Mal1g5964 120 PRINTS Thioredoxin family signature 31 39 - -
Mal1g5964 120 PRINTS Thioredoxin family signature 39 48 - -
Mal1g5964 120 CDD TRX_family 19 110 - -
Mal1g5964 120 TIGRFAM thioredoxin: thioredoxin 16 112 IPR005746 GO:0015035
Mal1g5964 120 Gene3D Glutaredoxin 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5964 Mal-Chr1 137453478 137455316 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5964 1 137453478 137455316 Mal1g5964 1 137453478 137455316 ECH
Mal1g5964 1 137453478 137455316 Mal2g0526 2 6156557 6157986 PCT