Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5948 ATGGCCACGTCTAGTGGAAACTCTAGCGTGTCAACAAAATCTCAAAGCTATGGCTCTGAGGAAGATTTGCAGCTTCTAATGGATCAAAGAAAGAGGAAGAGAAAGCAATCGAATCGCGAATCGGCAAGAAGATCAAGGATGAGGAAGCAGAAGCACATGGATGATTTAATTGTTGAAGTGGAAAGACTAAGAAATGAAAACAGTGAAATCATCACAAGGATGAACATGACAACACAACACTATCTTAAAATTGAGGCAGAGAATTGTGTTCTAATGGCTCAAATGTGTGAACTTAATCAAAGGCTACAATCACTGAATGATATCATCAACATGATCAACACAACAACTACTACTACTGGAGTTAATTATCAAAATAATGATTGTTTTTTAACAATTTCAGATAATTGCTTCATGAATCAAATGAATATGTCATATCTTAATCAACAACCAATTATGGCCTCTGCAGACATGTTTATGTGGTGA 483 0.3582 MATSSGNSSVSTKSQSYGSEEDLQLLMDQRKRKRKQSNRESARRSRMRKQKHMDDLIVEVERLRNENSEIITRMNMTTQHYLKIEAENCVLMAQMCELNQRLQSLNDIINMINTTTTTTGVNYQNNDCFLTISDNCFMNQMNMSYLNQQPIMASADMFMW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5948 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Mal1g5948 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Mal1g5948 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Mal1g5948 160 Coils Coil 46 73 - -
Mal1g5948 160 MobiDBLite consensus disorder prediction 1 53 - -
Mal1g5948 160 MobiDBLite consensus disorder prediction 1 22 - -
Mal1g5948 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Mal1g5948 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Mal1g5948 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Mal1g5948 160 Pfam bZIP transcription factor 30 86 IPR004827 GO:0003700|GO:0006355
Mal1g5948 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Mal1g5948 160 Gene3D - 28 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5948 Mal-Chr1 137324522 137325004 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g5948 bZIP_1 9.9e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5948 1 137324522 137325004 Mal1g5948 1 137324522 137325004 ECH