Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5945 ATGTCAGGTCCTCTTGATCGCTTCGCTCGTCCATGTTTTGAAGGTTTTTCTGGTAATGATGAAAGAAGAGAGCAGCGAAAATCGGATTTTGAGAATTCGGAGGATGATCGGCGAGCAAGAAATGGAAGTTTGAAAAAGAAAGTGATCAATGCGTCTAGTAAATTCAGGCATTCTCTTAGGAAGAAAAGTAGTAGCAAGAGAAAGAATGCGAGTCGGTGTAATTCGCTTGCAATTGAGGATGTTCGAGATGTTAAGGAGTTACAAGCAGTGGATGCTTTTCGACATTCGCTTATTTCGGATTGCTTGTTGCCTTCAAGACATGATGACTATCATATGTTATTGAGATTCTTGAAAGCAAGGAAATTTGACATTGAGAAGGCAAAGCACATGTGGGCCAACATGGTCCAATGGAGGAAAGAGTATGGTACCGATACAATTATGGAGGATTTTGAGTTCAGTGAGTTGGACGAAGTCCTACAATACTATCCACATGGTTATCACGGTGTTGATAAGGAAGGAAGACCTGTTTATATTGAGAGGCTAGGTAAAGTTGATCCCAATAAGCTTATGCAAGTAACTACCATGGAAAGGTATTTAAAATACCATGTACAGGGTTTTGAGAAAACGTTTGCTGTTAAGTTTCCTGCTTGTTCTATTGCTGCCAAGAGACATATAGATTCAAGTACAACCATTTTGGATGTTCATGGTGTGGGTTTCAAAAACTTCACAAAAACTGCACGGGAACTCATCCAACGACTGCAGAAAATTGATGGTGACTACTATCCCGAAACATTATGTCGAATGTTTATAATCAATGCTGGCCCTGGTTTCAAGCTTCTTTGGAACACAGTGAAAACATTTATTGATCCCAAAACTAGTTCAAAGATAAATGTTCTTGGAAACAAGTTCCAGCAGAAGTTGTTTGAAATAATTGATGTCAGTGAGCTGCCAGAGTTTCTTGGTGGTAGTTGTACTTGTATAGATCAAGGCGGTTGTATGAGGTCTGATAAAGGGCCATGGCAAGATCCAAACATTTTAAAGATGGTTCTCAATGGTGAAATACAATGTTCTAGACAGATAGTAACGATTTCTAATGACGATGGGACAGTGATTGAATGTGATAAGGCATCTTATCCAATGATGCAGATAAGAAGTAGTGATACATCAACAGCAGAATCAGGATCTGAAGTTGAAGATATCACTTCCCCCAAAGCAAGTGGGAATTATACAAATCCTAGGTTGACTCCTGTCCATGAAGAAGCAAGATTGGCTGGTAGGGCTGGTCTTTCTGCCGGTTTCTCTGAGTATGATGAGTATGTTCCCATGGTTGACAAGACTGTCGATGTTGCATGGAAGGAGAAACAAGTGACAACTAAAAACTCATATCGAACAACAGAAAAGTATTTATTGAGGACTGGAGAATCGGATGGACGCCGTGCATATATCTGGGCTTTTATCATTGGCTTCTTTGTTGCCATTTTTACTTTTGCTCGTTCAATGGCATTTCGTATGACTAAGGGAATAAAGCACAATGAATCTGACTGTGTCCAACCAACAACCAAGGAGGAATCTCGTCCCCCATCACCTGCTCCCATATCGACAAAGGAAGAACATGTCCCATCTGCTTTGAAACGCCTTTGTGAGCTTGAAGAGAAGGTTGAAATGCTACAGTTAAAACCTAATGTAATGCCATGTGAGAAAGAGGAGCTGCTGAATGCTGCTGTTTATCGCGTGGATGCATTGGAAGCTGAATTGATCACTACAAAGAAGGCTTTATACGAAGCTTTGATTAGACAAGAAGAACTTATGGCATACATAGACAATCAGGAAAGAAGAAAATTCGAGAAAAGGAAGTTTTGCCGGTTTTGA 1869 0.4024 MSGPLDRFARPCFEGFSGNDERREQRKSDFENSEDDRRARNGSLKKKVINASSKFRHSLRKKSSSKRKNASRCNSLAIEDVRDVKELQAVDAFRHSLISDCLLPSRHDDYHMLLRFLKARKFDIEKAKHMWANMVQWRKEYGTDTIMEDFEFSELDEVLQYYPHGYHGVDKEGRPVYIERLGKVDPNKLMQVTTMERYLKYHVQGFEKTFAVKFPACSIAAKRHIDSSTTILDVHGVGFKNFTKTARELIQRLQKIDGDYYPETLCRMFIINAGPGFKLLWNTVKTFIDPKTSSKINVLGNKFQQKLFEIIDVSELPEFLGGSCTCIDQGGCMRSDKGPWQDPNILKMVLNGEIQCSRQIVTISNDDGTVIECDKASYPMMQIRSSDTSTAESGSEVEDITSPKASGNYTNPRLTPVHEEARLAGRAGLSAGFSEYDEYVPMVDKTVDVAWKEKQVTTKNSYRTTEKYLLRTGESDGRRAYIWAFIIGFFVAIFTFARSMAFRMTKGIKHNESDCVQPTTKEESRPPSPAPISTKEEHVPSALKRLCELEEKVEMLQLKPNVMPCEKEELLNAAVYRVDALEAELITTKKALYEALIRQEELMAYIDNQERRKFEKRKFCRF* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5945 622 Gene3D - 142 353 IPR036865 -
Mal1g5945 622 SUPERFAMILY CRAL/TRIO domain 154 348 IPR036865 -
Mal1g5945 622 SMART CRAL_TRIO_N_2 109 134 IPR011074 -
Mal1g5945 622 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 3 618 - -
Mal1g5945 622 Pfam CRAL/TRIO, N-terminal domain 107 133 IPR011074 -
Mal1g5945 622 MobiDBLite consensus disorder prediction 1 43 - -
Mal1g5945 622 SMART sec14_4 154 325 IPR001251 -
Mal1g5945 622 PRINTS Cellular retinaldehyde-binding protein signature 112 134 - -
Mal1g5945 622 PRINTS Cellular retinaldehyde-binding protein signature 281 300 - -
Mal1g5945 622 MobiDBLite consensus disorder prediction 513 539 - -
Mal1g5945 622 MobiDBLite consensus disorder prediction 385 413 - -
Mal1g5945 622 Pfam CRAL/TRIO domain 160 322 IPR001251 -
Mal1g5945 622 MobiDBLite consensus disorder prediction 16 43 - -
Mal1g5945 622 CDD SEC14 155 322 IPR001251 -
Mal1g5945 622 SUPERFAMILY CRAL/TRIO N-terminal domain 85 150 IPR036273 -
Mal1g5945 622 Gene3D - 63 141 - -
Mal1g5945 622 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 154 328 IPR001251 -
Mal1g5945 622 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5945 Mal-Chr1 137277332 137282427 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5945 1 137277332 137282427 Mal1g5945 1 137277332 137282427 ECH