Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5931 ATGCCATTCAAGAGTATTGTAAGAGAGCTCAAGGAGATGAAAGATGGAATTGGCAACATGTATAGAAGAGGTGTTGAAACCAAGCATATGCATAGACATGGAAAATCTCACATAGCACCTGAATGTTCCTCACCATCACCACCACCAACAACAAGAACATCATCATCATCATCAGAGAGTCAATGGGCTAATTTACCTCCTGAGTTGCTATTAGACATAATTCAAAGGGTGGAAGCTAGTGAAACCTCTTGGCCATCTCGCCGAGCACTTATAGCTTGTGCCTCAGTTTGTAGGCTGTGGAGAGACATAACAAAGGGTGTTGTTAAGACACTTGAACAGTGTGGTTGGATCACTTTCCCTATATCATTGAAGCAGCCTGGTCCAAGAGACAATCCAATTCAGTGTTTTATCAAGAGAGAAAGGGCTACTTCCACATATAGTTTGTATCTTGGTCTAAGCCCCGCTCTTTCTGGCGATATGAGCAAACTTCTTTTGGCAGCAAAGAAGATTAGAAGAGCAACATGTACAGAATTTTTAATTTCATTGGTTGCTAATGATTTCTCTAGAGCTAACAACACTTACATTGGAAAGTTAAGGTCTAATTTTCTCGGCACCAAGTTCACGATCTTGGATGGTAATCCTCCACATGATTCTTCGCTTCCATCGAGGTGCAATTTGCAACAAAAGGTCCATCTGAAGCAAGTACTTCCAAAGGCTGCTCCTGCTACTGCTAACTATAAAGTAGCAACTGTATCTTATGAACTCAATGTTCTTCGTACGAGAGGTCCAAGGCGAATGCGGAGTACAATGCACTTAATCCCCATATCTTCAGTACAAGAAGGAGGAACTGCTCCTACTCCTATGGAATCTACTAACTGCCACAATGAGCACGAATCTTCAAAAGGAAAGAAGCCAGAAATTGTTGAATTTGGTTCAACTTGCACTGATTTTGCAAGAGAACCATTGATTTTGAAAAACAAAGCACCTAGATGGCATGAACAACTGCAATGTTGGTGCTTGAATTTCAAGGGACGGGTTACGGTGGCTTCGGTGAAGAATTTTCAGCTTGTAGCAGCTGCAGAACCTTGCCAAAACGTTTCGGCTGCAGAACAAGAGAAAGTTATACTACAATTTGGAAAAATTGGAAAGGATATATTCACCATGGATTATCGATATCCCCTCTCCGCTTTTCAAGCCTTTGCAATTTGTTTGAGCAGCTTTGACACAAAACCAGCTTGTGAATAA 1245 0.4137 MPFKSIVRELKEMKDGIGNMYRRGVETKHMHRHGKSHIAPECSSPSPPPTTRTSSSSSESQWANLPPELLLDIIQRVEASETSWPSRRALIACASVCRLWRDITKGVVKTLEQCGWITFPISLKQPGPRDNPIQCFIKRERATSTYSLYLGLSPALSGDMSKLLLAAKKIRRATCTEFLISLVANDFSRANNTYIGKLRSNFLGTKFTILDGNPPHDSSLPSRCNLQQKVHLKQVLPKAAPATANYKVATVSYELNVLRTRGPRRMRSTMHLIPISSVQEGGTAPTPMESTNCHNEHESSKGKKPEIVEFGSTCTDFAREPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAAEPCQNVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5931 414 Gene3D - 55 107 - -
Mal1g5931 414 SUPERFAMILY Tubby C-terminal domain-like 112 414 IPR025659 -
Mal1g5931 414 MobiDBLite consensus disorder prediction 278 302 - -
Mal1g5931 414 Pfam Tub family 123 409 IPR000007 -
Mal1g5931 414 ProSitePatterns Tub family signature 1. 342 355 IPR018066 -
Mal1g5931 414 PANTHER TUBBY-LIKE F-BOX PROTEIN 1 414 - -
Mal1g5931 414 PANTHER TUBBY-RELATED 1 414 - -
Mal1g5931 414 SUPERFAMILY F-box domain 50 105 IPR036047 GO:0005515
Mal1g5931 414 PRINTS Tubby superfamily signature 245 272 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 392 414 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 178 194 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 371 390 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 342 358 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 324 341 IPR000007 -
Mal1g5931 414 PRINTS Tubby superfamily signature 194 218 IPR000007 -
Mal1g5931 414 MobiDBLite consensus disorder prediction 27 61 - -
Mal1g5931 414 ProSitePatterns Tub family signature 2. 399 414 IPR018066 -
Mal1g5931 414 Gene3D Tubby Protein; Chain A 120 414 IPR025659 -
Mal1g5931 414 MobiDBLite consensus disorder prediction 278 293 - -
Mal1g5931 414 Pfam F-box domain 62 108 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5931 Mal-Chr1 137060074 137061782 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Mal1g5931 Tub 3.8e-104 CL0395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5931 1 137060074 137061782 Mal1g5931 1 137060074 137061782 ECH