Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5922 ATGGCCTCAAGTTCAGCTTGGACAACAAAGCAAAACAAAAGATTTGAGAATGCTTTGGCCATATATGACAAGGACACACCAGATAGGTGGCAGAAACTAGCAAGAGCTGTTGGAGGGAAGACAATTGAGGAAGTGAAAAGGCATTATGAGATGCTAGTTGAAGATTTGAAGCAAATTGAAGAAGGTCATGTTCCTTTACCAAAATACAGAAATGTTGCATCAATCAAAGGTTACAATTATATTGATGAAGAACAAAGGTTGAAGTTTCTAAGCCTTCAATGA 282 0.3759 MASSSAWTTKQNKRFENALAIYDKDTPDRWQKLARAVGGKTIEEVKRHYEMLVEDLKQIEEGHVPLPKYRNVASIKGYNYIDEEQRLKFLSLQ* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5922 93 SMART sant 3 55 IPR001005 -
Mal1g5922 93 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Mal1g5922 93 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Mal1g5922 93 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Mal1g5922 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 93 - -
Mal1g5922 93 CDD SANT 6 53 IPR001005 -
Mal1g5922 93 Coils Coil 42 62 - -
Mal1g5922 93 Gene3D - 1 66 - -
Mal1g5922 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Mal1g5922 93 SUPERFAMILY Homeodomain-like 7 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5922 Mal-Chr1 136984958 136985421 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g5922 Myb_DNA-binding 6.8e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5922 1 136984958 136985421 Mal1g5922 1 136984958 136985421 ECH
Mal1g5922 1 136984958 136985421 Mal2g0566 2 6534319 6535207 PCT