Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5918 ATGAAAATGAAGAGTGGAATAACAGTGAGTGTTGTTATGGTATTGTTTTTGTTAGTGGAGTTAACAGTGAGTTTGAGTTCAAGAACTGAAAGGTTAGCGTTATTGGAGCTTCGTTCGTCGATGGGGATAAGGGGAAAAGATTGGCATAAAAAAGCAGAACCGTGTCGGAACTGGACCGGTGTTGAATGCCGGAATAATCGAGTTGTAGGCATCAACGTGTCCGGGTTAAAGAGAACCCGGCAGGGCCGTCTTAACCCGAGTTTTGAAGTTGATTCTCTGGCAAATTTCACACTATTGGAGTCTTTTAATGCTTCTGGGTTCATGCTTAATGGGTCTATACCAGAGTGGTTTGGTGAGAGACTTGGTGCACTGAAAGAGCTTGATTTAAGATCTTGTTCAATATCTGGTGTGATTCCTGGTTCACTTGGGGGAATGAGAAGTTTGAAGAATTTGTTTCTTTCAAGGAATAATCTTACTAGTAGAGTGCCTTCAGGTTTGGGGTTGTTATCTAGTCTTTCTATTCTTGATCTCTCTAGGAATTTGCTTTCAGGATCAGTACCTGAATCTTTCTCTAAGCTTGGTAACCTTACAAGGCTTGATCTTTCTAATAATTACTTATCTGGGTCTATTCCACCTGAACTTGGTACCCTTTCAAATCTTCAAAATTTGAACCTTTCTAATAATTCTTTCACTTCTTTGGTTCCCTCTCAGCTAGGTAGTCTTTCAAAATTGGTTGAGCTTGATCTTAGTATGAATTCTCTTTCTGGGTTGTTGCCGGGTAGTTTGTTGTCAATGCCTAGCTTGCTAATATTTGATGTATCAGACAACAGTCTCACTGGTACACTACCTAAATTGTCTGGTTTAAATTTTAGCTCGGATGGCGTATTCAATCTATCAAACAATTTGTTTTATGGATCTGTTAATGGTTTTATGAACAAGATCAAAATGATTGATTTGTCTGGCAATTATTTGGAAGGTGATGGTGGTGGTCTTAGTGATGTTGCTCTAGCTAGAAATTGCCTACAGATGATTTCAAACCAGAGAAATTTGGAAGAGTGTAGAATGTTTTATGTCCAGAGAAATTTACCCTTTGCTTCTGGTGGCCATGAGTCCAAGAAAAACAAACGATTGATATTCATACTGGCAGGTATATTTGGTGGGATTGGCTTTATTGTGCTACTGGTATTGGTCCTCATATTGGTTACGAAACAATGTCATAAAAGTAAAGATTTGGAAATTGAAAGAGGGACCACAAATGGGGGGCCTGTTACAGAAGGGGAAAGTCCTACACCTAAGGATCCTGTTTTTGTAACTGCTGTGGGAGAATCATTTACTTTTGAACAAATGCTCCATATGACTGGCAATTTTGATGAAGCAAACTTAATAAAGCATGGTCATTCTGGAGACTTTTTCTGGGGAGTTTTGGACAATGGAGCAAGTGTGGTTGTCAAAAGGGTAGATTTAAGCTTATTTAAGAAAGAATCTTACATTGTAGAATTGGGATTATTGAGCAAGGTTTCACATGCAAGATTGGTCCCAATCCTGGGACACTGCATGGACAATGAGAAGGATAAATGTATAGTTTACAAGTACATGCTAAATGGAGATTTGGCTGCTTCCTTGCACAGAGTCAGTGGTTCAGATGGAAAATTGCAGTCCATGGATTGGATCACAAGATTGAAAATTGCAACAGGAGCTGCTGAAGGCCTAGCTTACCTACATGATTGCAGCCCTCCCCTTGTTCACAGAGATATCCGAGCTAGTAGCATACTTCTTGATGATAAATTTGAAGTGCGACTTGGAAGTTTAAGTGAGGTTACTGCCCAAGGAGATCTTCATCAGAATGTCATGTCAAGAGTTTTCAGCAAGCCAATATCTTCTAATCAAGGCAATTCTGGTAAATCATCATTGACATGTGCCTATGATGTCTACTGTTTTGGGAAGATTTTACTCGAACTTGTTACCGGTAATATTGATATCAGCAAATCAGATGACGCCACCACAAAGGATTGGTTAGAGTACACCTTGTGCTACATCACCATATTCGATAAAGAACGGTTGACTAAGATTGTTGACCCAACTTTGATAGTGGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATTGTGGCCAAGTCATGCCTGAATCCTAAGCCTTCCAAACGTCCTCCAATGAGACATGTCCTCAAAGCACTTGAAAATCCATTGAAGATTGTTAGAGAAGAAAGTTTTAATACAGCAAAATTGAGAGCAACTTCATCTAATAGATCTTGGAGCACTGCATTCTTTGGTAGCTGGAGACACAGCTCATCAGACAGTGGTGCTACCATAACACATACAAATAGGGAGGGTTCTAGTGGCACTAAACAAACAGGAAGAATGGGTTCTCATGGTAGTGGTGGCAATGATCACTCCTCTTCCAATAAAAGGTCATCCAATGAAATTTTCCCTGAACCGTTGGGAATGCAAGACGTGGAGAGTGGAGAGGCAAAATGA 2499 0.4006 MKMKSGITVSVVMVLFLLVELTVSLSSRTERLALLELRSSMGIRGKDWHKKAEPCRNWTGVECRNNRVVGINVSGLKRTRQGRLNPSFEVDSLANFTLLESFNASGFMLNGSIPEWFGERLGALKELDLRSCSISGVIPGSLGGMRSLKNLFLSRNNLTSRVPSGLGLLSSLSILDLSRNLLSGSVPESFSKLGNLTRLDLSNNYLSGSIPPELGTLSNLQNLNLSNNSFTSLVPSQLGSLSKLVELDLSMNSLSGLLPGSLLSMPSLLIFDVSDNSLTGTLPKLSGLNFSSDGVFNLSNNLFYGSVNGFMNKIKMIDLSGNYLEGDGGGLSDVALARNCLQMISNQRNLEECRMFYVQRNLPFASGGHESKKNKRLIFILAGIFGGIGFIVLLVLVLILVTKQCHKSKDLEIERGTTNGGPVTEGESPTPKDPVFVTAVGESFTFEQMLHMTGNFDEANLIKHGHSGDFFWGVLDNGASVVVKRVDLSLFKKESYIVELGLLSKVSHARLVPILGHCMDNEKDKCIVYKYMLNGDLAASLHRVSGSDGKLQSMDWITRLKIATGAAEGLAYLHDCSPPLVHRDIRASSILLDDKFEVRLGSLSEVTAQGDLHQNVMSRVFSKPISSNQGNSGKSSLTCAYDVYCFGKILLELVTGNIDISKSDDATTKDWLEYTLCYITIFDKERLTKIVDPTLIVDEDLLEEVWAMAIVAKSCLNPKPSKRPPMRHVLKALENPLKIVREESFNTAKLRATSSNRSWSTAFFGSWRHSSSDSGATITHTNREGSSGTKQTGRMGSHGSGGNDHSSSNKRSSNEIFPEPLGMQDVESGEAK* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5918 832 PRINTS Leucine-rich repeat signature 241 254 - -
Mal1g5918 832 PRINTS Leucine-rich repeat signature 196 209 - -
Mal1g5918 832 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 17 267 - -
Mal1g5918 832 Pfam Protein tyrosine and serine/threonine kinase 463 732 IPR001245 GO:0004672|GO:0006468
Mal1g5918 832 SUPERFAMILY L domain-like 48 326 - -
Mal1g5918 832 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 264 787 - -
Mal1g5918 832 MobiDBLite consensus disorder prediction 768 832 - -
Mal1g5918 832 Gene3D Phosphorylase Kinase; domain 1 427 531 - -
Mal1g5918 832 Gene3D Ribonuclease Inhibitor 189 350 IPR032675 -
Mal1g5918 832 MobiDBLite consensus disorder prediction 413 432 - -
Mal1g5918 832 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Mal1g5918 832 SUPERFAMILY Protein kinase-like (PK-like) 436 733 IPR011009 -
Mal1g5918 832 PANTHER RECEPTOR-LIKE PROTEIN 55 264 787 - -
Mal1g5918 832 PANTHER RECEPTOR-LIKE PROTEIN 55 17 267 - -
Mal1g5918 832 Gene3D Transferase(Phosphotransferase) domain 1 532 756 - -
Mal1g5918 832 ProSiteProfiles Protein kinase domain profile. 456 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5918 832 SMART LRR_typ_2 241 264 IPR003591 -
Mal1g5918 832 SMART LRR_typ_2 217 240 IPR003591 -
Mal1g5918 832 SMART LRR_typ_2 145 168 IPR003591 -
Mal1g5918 832 SMART LRR_typ_2 121 144 IPR003591 -
Mal1g5918 832 SMART LRR_typ_2 169 192 IPR003591 -
Mal1g5918 832 SMART LRR_typ_2 193 215 IPR003591 -
Mal1g5918 832 Gene3D Ribonuclease Inhibitor 27 188 IPR032675 -
Mal1g5918 832 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
Mal1g5918 832 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Mal1g5918 832 Pfam Leucine rich repeat 218 278 IPR001611 GO:0005515
Mal1g5918 832 MobiDBLite consensus disorder prediction 768 815 - -
Mal1g5918 832 Pfam Leucine Rich Repeat 124 144 IPR001611 GO:0005515
Mal1g5918 832 ProSiteProfiles Leucine-rich repeat profile. 195 217 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5918 Mal-Chr1 136945409 136948930 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mal1g5918 PK_Tyr_Ser-Thr 1.4e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5918 1 136945409 136948930 Mal1g5918 1 136945409 136948930 ECH