LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g5916	ATGGCTATTATACCTCGTCAAGCTAAAGGACCAACTGGGTTATGGGTGAAGATGACAGCTGTAACAATTTTGGGTCTATGTTTTATTTTTGTTTGGACTGTGTTTTCATCTTCATCTTCTTCTGTTACTTTTCAAAGGGAAAGTTTTGAAGATATTTCAGAACCTGTTTCTTCTTCTTCTTCTTCCAATGCTAAAAAACAAACACCTAAACCAGAAAAACGTGTGGAAGTGGAGAAAGATCATAAATTTCATGAGAGTGATGAAAAAAGAGTTAATGGGTCATCTTCACATTCTTCTTCAACGCGCCCTCATAAGAAAGAAGTGGCGCGTGAGAAGAAACGTGTGCATAAGAAGGAAGATAGTAAAGAGAATGTGAATCAAGGGTCATTGGAGAAAGAGGAAGAAGGTGAAAAAGAGTTGGAAGATAAAGAAGATGGATTGGAATTGGATCATGAGAGTGAAGTTGATTTGGATTCTGATGTTGGTGGTGTTGAGGATTCAGCTGAATCTGTTGATGAAGATTCTGAGATATTGGAAGAGTTAAAGAAAACAAGGAAGGGAAAAGTGAAAGGACCTTTGTTTGAATCAAATGTTAACTATAGATGGAAAATGTGCAATACTAGAAGCAAGCATAACTACATTCCTTGTATTGATATTGAAGTAGGTGGTGGAAAGGTGCAGAGTTATCGGCATACGGAGAGGAGTTGTCCAAGGGCATCCCTCATGTGTATGGTTCCTCTTCCTCTTGAAGGTTATGGGTCTCCAGTGCCGTGGCCTGAGAGCAAATTGAAGATATTGTATAAGAATGTTGCACACCCGAAACTATCTGCATATATAAAAAGGCATAGTTGGTTGGTGGATTCTGGAGAGTATCTTACTTTCCCTCAAAACCAGTCTGAGTTTTTGGGAGGGGTTCAACACTATCTTGAGTCCATGGAAGAGATGGTACCAGACATTGAGTGGGGTAAAAATATTCGTGTTGTCCTGGACATTGGATGTACAGATTCAAGCTTTGCAGCTGCTCTCCTCGATAAGGATGTTTTAACATTGTCACTTGGCTTGAAAGATGACCTAGTGGACTTGGCTCAAGTGGCACTCGAGCGCGGCTTCCCAACATTGGTTAGCCCTTTTGCTAGAAGGAGACTTCCTTTTCCAAGTCAAGTTTTTGATGCTATACATTGTTCCCGTTGCAGCATACCTTGGCATTCCAATGGAGGTAAGCTTCTACTGGAGATGAATCGGATTTTAAGACCTGGTGGATACTTTATTATGTCAACTAAACATGACAGCATTGAAGAAGAAGAAGCCATGACCGCGCTGACAGCATCTATTTGTTGGAATGTTCTGGCGCATAAAAGTGATGATGTTGGTGAAGTTGGAGTTAGAATATATCAAAAGCCTGAAGGAAATGACATATACGAATTGAGAAGGAAGAAGATCCCACCGCTTTGTAAAGAAAATGAAAATCCCGATGCAGTCTGGCATGTTCCAATTAAGACTTGTTTGCACACAATTCCAATTGGAATTGAACAACATGGGGCAGAGTGGCCTGAAGAATGGCCGAAGAGGCTCGAAACTTATCCCGACTGGATGAACAATAAAGAGAAATTGATCGCGGACACCAACCATTGGAACGCCATAGTTAACAAGTCATATCTCAATGGAATGGGCATTAACTGGACAAGTATCAGGAATGTAATGGACATGAAATCCATCTATGGAGGATTGGCTGCAGCTCTATCTAAACAGAACGTTTGGGTGATGAATGTAGTACCTGTTCATGCACCGGATACGCTTCCCATAATTTTTGAACGGGGATTTTTTGGCGTCTATCACGATTGGTGTGAGTCTTTTGGTACTTATCCAAGAACTTATGACCTTCTGCATGCTGATCATTTGTTCTCACGCCTCAAAAACAGGTGCAAGCAACCTGTGTCCATTGTTGTTGAGATGGACCGTATCTTACGCCCAGGAGGGTTGACAATCATACGAGACAAAGTTGAAATCCTAAATGCATTGGAGGAAATATTGAGAAGTCTACAATGGGAGATCATAATGACTTTCTACCAGGAAAAGGAGGGCATCTTGTGTGCACAGAAAACTCTATGGAGGCCTTGA	2118	0.4117	MAIIPRQAKGPTGLWVKMTAVTILGLCFIFVWTVFSSSSSSVTFQRESFEDISEPVSSSSSSNAKKQTPKPEKRVEVEKDHKFHESDEKRVNGSSSHSSSTRPHKKEVAREKKRVHKKEDSKENVNQGSLEKEEEGEKELEDKEDGLELDHESEVDLDSDVGGVEDSAESVDEDSEILEELKKTRKGKVKGPLFESNVNYRWKMCNTRSKHNYIPCIDIEVGGGKVQSYRHTERSCPRASLMCMVPLPLEGYGSPVPWPESKLKILYKNVAHPKLSAYIKRHSWLVDSGEYLTFPQNQSEFLGGVQHYLESMEEMVPDIEWGKNIRVVLDIGCTDSSFAAALLDKDVLTLSLGLKDDLVDLAQVALERGFPTLVSPFARRRLPFPSQVFDAIHCSRCSIPWHSNGGKLLLEMNRILRPGGYFIMSTKHDSIEEEEAMTALTASICWNVLAHKSDDVGEVGVRIYQKPEGNDIYELRRKKIPPLCKENENPDAVWHVPIKTCLHTIPIGIEQHGAEWPEEWPKRLETYPDWMNNKEKLIADTNHWNAIVNKSYLNGMGINWTSIRNVMDMKSIYGGLAAALSKQNVWVMNVVPVHAPDTLPIIFERGFFGVYHDWCESFGTYPRTYDLLHADHLFSRLKNRCKQPVSIVVEMDRILRPGGLTIIRDKVEILNALEEILRSLQWEIIMTFYQEKEGILCAQKTLWRP*	706

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g5916	705	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	297	433	IPR029063	-
	Mal1g5916	705	MobiDBLite	consensus disorder prediction	67	92	-	-
	Mal1g5916	705	Coils	Coil	130	150	-	-
	Mal1g5916	705	PANTHER	METHYLTRANSFERASE PMT28-RELATED	9	705	-	-
	Mal1g5916	705	MobiDBLite	consensus disorder prediction	52	66	-	-
	Mal1g5916	705	CDD	AdoMet_MTases	328	425	-	-
	Mal1g5916	705	Gene3D	Vaccinia Virus protein VP39	305	472	IPR029063	-
	Mal1g5916	705	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	9	705	IPR004159	GO:0008168
	Mal1g5916	705	MobiDBLite	consensus disorder prediction	113	136	-	-
	Mal1g5916	705	MobiDBLite	consensus disorder prediction	52	175	-	-
	Mal1g5916	705	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	212	700	IPR004159	GO:0008168
	Mal1g5916	705	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	559	684	IPR029063	-
	Mal1g5916	705	MobiDBLite	consensus disorder prediction	137	175	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g5916	Mal-Chr1	136924264	136933207	Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mal1g5916	1	136924264	136933207	Mal1g5916	1	136924264	136933207	ECH