Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5883 ATGATGAGAGAAAGAAAAAGGAGAGCCATAACAACAAAGATATTCAAAGGACTTCGAGCTCAAGGGAACTACAATTTGTCGAAGCATTGTGACAACAACGAGGTCCTCAAAGCTCTTTGTGCAGAAGCTGGCTGGTTGGTCGAAGGAGACGGAACCACTTATCGCAAGGGTTACAATGATGCAAGCACCTCAACCAGAACCACCCCTTTCTCTTATTCCCAAAATCCAAGTCTCATTTCTCTATCTTTTCCAACTTCAATTCCTTCATACCAATTCACTCCTCTGTCCTCTCCTCCTTTGTGGATATCAAACAATGCTCCTATGACACCTCTCAGCTCACCAACATCAACAGACCTCAAACCAATTCCAACATGGGACTCCATTTCCAAAGAATCTATGGCCTTTTTCAATTACCCTTTTGTTGCATCTTCTACCCTTGCTAGCCCAAAACACCAAAACCTTCATACTCCAATGAAGTTCCAAGCTTTTGCACAATCTTCATTTGCAGTGCCAAGTTCTTCAACCTTCAATGTTGTGGCTGATAACTCAATCCGAGAGATGAGAAGTTCAAAAATGCTTGGGGTGCAAATAAAGCCTTGGGTTGGTGAAAAAGTTCATGATGATGGATTGGATGATTTGGAACTCACTCTTGGAACTGGAAAAGGAAGGATTTAG 675 0.4222 MMRERKRRAITTKIFKGLRAQGNYNLSKHCDNNEVLKALCAEAGWLVEGDGTTYRKGYNDASTSTRTTPFSYSQNPSLISLSFPTSIPSYQFTPLSSPPLWISNNAPMTPLSSPTSTDLKPIPTWDSISKESMAFFNYPFVASSTLASPKHQNLHTPMKFQAFAQSSFAVPSSSTFNVVADNSIREMRSSKMLGVQIKPWVGEKVHDDGLDDLELTLGTGKGRI* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5883 224 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 98 IPR008540 -
Mal1g5883 224 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 94 157 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mal1g5883 224 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 94 157 - -
Mal1g5883 224 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 158 223 - -
Mal1g5883 224 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 97 - -
Mal1g5883 224 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 97 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mal1g5883 224 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 158 223 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5883 Mal-Chr1 136498975 136500314 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mal1g5883 BES1_N 8.6e-37 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5883 1 136498975 136500314 Mal1g5883 1 136498975 136500314 ECH
Mal1g5883 1 136498975 136500314 Mal2g0582 2 6695721 6697398 PCT