Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5878 ATGGAGTTCGTTTTTCGCTTCAGTTCTTGCATGCCGTTCAGATTTCGTTTTCACCTTCCACTCGCCATCTTCGTTTTCCAGATTGTATTGATATTGTCATGGTTGGAAGCAAACGATGCGAAGGCGCAAGAACAACAATTTCAATCGGAAGGGTTGGAAGGGAGGGTTGAGAAAGTTGCCTCACATTCTTGCATACATGATCAGATACTTGAACAGAGAAAGCGACCTGGTCGCAAGGTGTATTCGGTTACCCCACAAGTTTACGAGCCTCGTAGATCGAAGCCACTTCAGCATAAAGGTAGGGCGTTACTTGGTGTTTCAACATCATCAAAGCCCCCAAAGGATGAAAAGAAACCTATTCGGATATATCTAAGTTATGATGCTGTTGGTCTCTCCCCTGACAGGGATTGTCAAAAAGTTGGTGACATGGTTAAGCTTGGGGACCCTCCGATTGCTTCTCTTCCTGGTTTGCCTTCTTGTAATCCTCTTGCTAATCCTCCAATCCTTGGTGATTGTTGGTATAACTGCACTTCTGAAGATATACCAGGAGAGGATAAAAAGCACCGCCTTCGTAAGGCATTAGGGCAGACAGCTGAGTGGTTTAGGAGAGCATTGGCTGTTGAGCCTGTCAATGGGAACTTGCGATTGAGTGGATATTCTGCATGTGGACAAGATGGAGGTGTGCAGGTTCCCCGTGAATATGTTGAAGAGGGAGTCTCTGATGCTGACTTAGTTCTTTTGGTGACTACAAGACCTGCTGCAACTGGGACCACACTTGCTTGGGCAGTGGCATGTGAACGAGATCAATGGGGTCGTGCTATAGCTGGACATGTTAATGTCGCTCCTCGTCATTTGACAGCTGAAGAAGAGACTTCGCTTTCAGCTACTCTGAAACACGAGGTTATCCATGTTCTTGGTTTTGATCCTCATGCCTTTACTCATTTTAGAGATGAAAGGAAAAGACTTCGTAATAAGGTTACTGAACAAGTTATGGATGAAAAGATTGGGCGAGCAGTAACACGTGTGGTGCTACCACGTGTTGTCATGCATTCACGACATCATTATGCGGCGTTCTCAGGAAATTTTACTGGTTTAGAGCTGGAAGATGGCGGAGAGAGTGGCACATCAGGGTCTCATTGGGAAAAAAGGCTTCTGATGAATGAGATCATGACTGGTTCAGTGGATACAAGATCCGTAATTTCAAAAATGACACTAGCTCTCTTAGAAGATAGCGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGGCGGAACCAGGGTACAGAGTTTGTTACCTCCCCTTGCAATCTCTGGAAGGGAGCCTATCATTGCAACACGGAAGAGTTTTCAGGTTGTACGTATAACAGAGAGGCGCAGGGTTACTGTCCCATTCAAACCTATAGCGGAGACCTTCCTCGGTGGGCTCAGTATTTTCCACAAGCTAATAAAGGTGGACCATCTTTATTCGCTGATTATTGCACTTATTTAGTGGCATACACTGATGGTATATGTACAGACACTAACAGTGCACCACCTGATACAATGCTAGGTGAAGTACGAGGAAGCAACTCTAGGTGTATGGCCTCATCATTAGTGCGCACGGGATTTGTACGAGGTTCTACGACCCAAGGAAATGGTTGTTATCAGCACCGGTGTATCAACAACACTTTAGAGGTTGCCGTGGATGGTATGTGGAGAGCGTGTCCTCAGGCTGGCGGATCCGTTCAGTTCTCGGGCTTTCATGGTGAATTAATCTGCCCTGCATATCTTGAGCTCTGTAACACAGGCTCGGTAGTTGACTCAGGGAGATGTCCCAGATCATGTAATTTCAATGGAGATTGTGTTGATGGAAGGTGCCACTGCTTTCTTGGATTTCATGGTCACGATTGCAGTAGTCGTTCCTGCCCCAGCAATTGCACTGGCAATGGCTTATGTCTCAACAATGGAATCTGTGAATGTAAAGCTGGTTACACTGGCATTGACTGTTCCACTGCTGTCTGTGATGAGCAATGCGGCCTTCATGGTGGGGTTTGTGATAATGGAATTTGCAAATTCCGCTGTTCTGACTATGGGAAATACACTTGCCAGAACAGCTCCTCTCTCTTCTCAACTCTTTCAGTATGCAAAAATGTGCTAGGAAATGATATTTCTGGGCAGCATTGTGCACCTAAAGAACTTAGCATGCTTCTTAAGCTAGAAGAAGTGGTTGTCATGCCCAACTACCACCGATTATTCCCTGGTGGCGCTAGGAAATTATTTAATATATTTGGCAGCACCTACTGTGATGAGGCAGCTAAACGGCTTGCTTGCTGGATCTCAATCCAGAAGTGTGACGGAGACAACAGACTACGTGTATGTCATTCTGCATGTCGGTCGTATAATCTAGCGTGTGGAGTTTCACTGGACTGCAATGACCAAACCATTTTCAGCAGCAAGGGTGAGGGTCAGTGTACCGGTTTTGGTGAGAAGCAATTGTCGTGGTTTAATCGATTTAGAAGCAGTTTTTCTTTGAGAAATAGTTACTCAAATGAAATATTAGTAAGAAACAGGCAGCTTTAA 2571 0.4535 MEFVFRFSSCMPFRFRFHLPLAIFVFQIVLILSWLEANDAKAQEQQFQSEGLEGRVEKVASHSCIHDQILEQRKRPGRKVYSVTPQVYEPRRSKPLQHKGRALLGVSTSSKPPKDEKKPIRIYLSYDAVGLSPDRDCQKVGDMVKLGDPPIASLPGLPSCNPLANPPILGDCWYNCTSEDIPGEDKKHRLRKALGQTAEWFRRALAVEPVNGNLRLSGYSACGQDGGVQVPREYVEEGVSDADLVLLVTTRPAATGTTLAWAVACERDQWGRAIAGHVNVAPRHLTAEEETSLSATLKHEVIHVLGFDPHAFTHFRDERKRLRNKVTEQVMDEKIGRAVTRVVLPRVVMHSRHHYAAFSGNFTGLELEDGGESGTSGSHWEKRLLMNEIMTGSVDTRSVISKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFVTSPCNLWKGAYHCNTEEFSGCTYNREAQGYCPIQTYSGDLPRWAQYFPQANKGGPSLFADYCTYLVAYTDGICTDTNSAPPDTMLGEVRGSNSRCMASSLVRTGFVRGSTTQGNGCYQHRCINNTLEVAVDGMWRACPQAGGSVQFSGFHGELICPAYLELCNTGSVVDSGRCPRSCNFNGDCVDGRCHCFLGFHGHDCSSRSCPSNCTGNGLCLNNGICECKAGYTGIDCSTAVCDEQCGLHGGVCDNGICKFRCSDYGKYTCQNSSSLFSTLSVCKNVLGNDISGQHCAPKELSMLLKLEEVVVMPNYHRLFPGGARKLFNIFGSTYCDEAAKRLACWISIQKCDGDNRLRVCHSACRSYNLACGVSLDCNDQTIFSSKGEGQCTGFGEKQLSWFNRFRSSFSLRNSYSNEILVRNRQL* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5878 856 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 1 829 - -
Mal1g5878 856 ProSitePatterns EGF-like domain signature 2. 655 666 IPR000742 -
Mal1g5878 856 Gene3D Leishmanolysin , domain 2 313 439 - -
Mal1g5878 856 Pfam Leishmanolysin 174 599 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mal1g5878 856 ProSitePatterns EGF-like domain signature 1. 655 666 IPR000742 -
Mal1g5878 856 Gene3D Leishmanolysin domain 3 443 501 - -
Mal1g5878 856 SMART egf_5 638 667 IPR000742 -
Mal1g5878 856 SMART egf_5 607 635 IPR000742 -
Mal1g5878 856 Pfam EGF-like domain 639 666 IPR013111 -
Mal1g5878 856 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 116 599 - -
Mal1g5878 856 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 1 829 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mal1g5878 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 249 278 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mal1g5878 856 PRINTS Leishmanolysin (M8) metalloprotease family signature 402 431 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Mal1g5878 856 Gene3D Laminin 638 669 - -
Mal1g5878 856 Gene3D Laminin 607 636 - -
Mal1g5878 856 Gene3D - 114 304 - -
Mal1g5878 856 Gene3D Leishmanolysin domain 4 503 597 - -
Mal1g5878 856 ProSiteProfiles EGF-like domain profile. 635 667 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5878 Mal-Chr1 136408789 136415847 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5878 1 136408789 136415847 Mal1g5878 1 136408789 136415847 ECH
Mal1g5878 1 136408789 136415847 Mal2g0585 2 6764357 6773191 PCT