Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5877 ATGGCCTTCAATCCAAACTCAAAAACCTCTCTTCTATTCAACGTGTTCCTCCTATTAGGTAATATAGCATATGCTACGGTGTTTACCATACAAAACCAATGCACTTATACAATTTGGCCGGGAACTCTTTCCGGCAACGGCGCCGCAATTCTCGGTCAAGGTGGTTTTTCGCTAGCCCCAGGTGCATCAATTAACTTGGCTGCACCATCAGGTTGGTCTGGACGCTTCTGGGCCCGGACTGGCTGCGAATTCGACAGTGCAGGCAATGGAAACTGTGTCACCGGAGATTGTCCCGGTGGACTAAACTGCATCGGAGGAGGTACCCCACCGGTGACATTGGCAGAATTCACTATTGGATCAGCCGGTAATGGCGGCAAGGACTTCTACGACGTGAGCTTGGTGGACGGCTACAACGTAGGAGTGGGTGTATGGGCTACCGGAGGAACCGGTGATTGTCAATATGCCGGGTGTGTTGCAGACTTGAATGGTGCTTGTCCGGCGGAGCTTAGGGTGAATGGCGCTGCGGCCGGTTCGGTGGTGGCGTGTAAGAGCGCATGTTTGGCGTTCAATACGGAGGAATTTTGTTGCACCGGCGAACATTCGACACCGCAGACATGTTCGCCAACACCTTATTCAGAGATATTTAAGAAAGCATGTCCAAGTGCTTACAGTTATGCTTATGATGATGCTTCAAGCACTTGCACTTGTTCTGGTTCCAATTACCATATCACGTTTTGCCCCAATGGATCATCATGA 756 0.504 MAFNPNSKTSLLFNVFLLLGNIAYATVFTIQNQCTYTIWPGTLSGNGAAILGQGGFSLAPGASINLAAPSGWSGRFWARTGCEFDSAGNGNCVTGDCPGGLNCIGGGTPPVTLAEFTIGSAGNGGKDFYDVSLVDGYNVGVGVWATGGTGDCQYAGCVADLNGACPAELRVNGAAAGSVVACKSACLAFNTEEFCCTGEHSTPQTCSPTPYSEIFKKACPSAYSYAYDDASSTCTCSGSNYHITFCPNGSS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5877 251 PIRSF PR5 3 251 IPR001938 -
Mal1g5877 251 Pfam Thaumatin family 32 247 IPR001938 -
Mal1g5877 251 PANTHER PATHOGENESIS-RELATED PROTEIN 5-RELATED 7 248 - -
Mal1g5877 251 SMART tha2 28 247 IPR001938 -
Mal1g5877 251 CDD TLP-PA 27 246 - -
Mal1g5877 251 Gene3D Thaumatin 26 247 IPR037176 -
Mal1g5877 251 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Mal1g5877 251 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Mal1g5877 251 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mal1g5877 251 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mal1g5877 251 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Mal1g5877 251 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Mal1g5877 251 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Mal1g5877 251 PANTHER OS03G0233200 PROTEIN 7 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5877 Mal-Chr1 136406553 136407421 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5877 1 136406553 136407421 Mal1g5877 1 136406553 136407421 ECH