Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5870 ATGAAGTTCAATTTTGCAAAACCAAAACTCTTATTTTTCTTTCTCACTCTCTCCCTCTTGTGTCTTCAATCTCTATCCTCCACCACCAAAAACAATGCCTCAGAAACTAGAAAAACAATTATCAAAGATCAATTCAAAGAAGCCCCTCAATTCTACAATTCACCAAATTGTGCCTCCATCATTGAACGAGAAGAAGACACCGAACAGGACACTGACACATATATCTGCTCCGAGGAAGCAGTCCATGTGGCAATGACATTAGACACAACATACATCCGAGGATCCATGGCTGCAATCTTGTCTGTCCTTCAACACTCATCATGTCCACAAAACATCATCTTTCACTTTGTTTGTTCCTCAAACACTTCACTTCTCCACTCCACAATTTCAAAATCCTTCCCTTACCTTAAATTCCAAGTCTACAATTTCGATGATTCCATCGTTTCGGGACTAATCTCAACCTCGATTCGATCAGCACTTGATTGTCCTCTCAACTATGCAAGAAGCTATTTGGCAAATCTAATTCCATTGTGTGTTAGAAAAGTTGTGTACTTGGATTCAGACCTTATCTTAGTTGATGATATCACAAAACTTGCATCAACACCATTAGCCGAAAAAAATGCAGTTTTGGCAGCACCAGAATATTGCAATGCAAATTTCACATTTTACTTCACACCAACATTTTGGTCCAACCCATCTTTGTCTTTGACATTCGCGAATCGAAAACCTTGTTACTTTAACACCGGGGTTATGGTAATTGATCTAGAAAAATGGCGCGCCGGCGACTACACAACGAAGATTGAGGAATGGATGGAATTACAAAAGAGAATGAGAATCTATGAACTTGGTTCATTGCCACCTTTTTTGCTTGTTTTTGCAGGGGAAATTGTTCCTGTGGATCATAGATGGAACCAACATGGTCTTGGTGGTGATAATTTTCGAGGTCTTTGTAGAGATCTTCATCCTGGTCCTGTGAGTTTATTGCATTGGAGTGGAAAAGGTAAACCTTGGGTGAGATTGGATGCTAATAGACCTTGTCCTTTGGATGCTCTTTGGGCACCTTATGATCTTTTGCAAACACCATTTTCTCTTGATTCTTGA 1101 0.3969 MKFNFAKPKLLFFFLTLSLLCLQSLSSTTKNNASETRKTIIKDQFKEAPQFYNSPNCASIIEREEDTEQDTDTYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIIFHFVCSSNTSLLHSTISKSFPYLKFQVYNFDDSIVSGLISTSIRSALDCPLNYARSYLANLIPLCVRKVVYLDSDLILVDDITKLASTPLAEKNAVLAAPEYCNANFTFYFTPTFWSNPSLSLTFANRKPCYFNTGVMVIDLEKWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGEIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSLDS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5870 366 Pfam Glycosyl transferase family 8 82 339 IPR002495 GO:0016757
Mal1g5870 366 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 82 346 IPR029044 -
Mal1g5870 366 SUPERFAMILY Nucleotide-diphospho-sugar transferases 81 357 IPR029044 -
Mal1g5870 366 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 20 366 - -
Mal1g5870 366 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 20 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5870 Mal-Chr1 136333060 136334160 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g5870 1 136333060 136334160 Mal1g5870 1 136333060 136334160 ECH
Mal1g5870 1 136333060 136334160 Mal2g0589 2 6806002 6807036 PCT