Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g5869 ATGAATCATGTTGTGTTTAATCTCTTCATTTTCTTCACACTAAGCATGCTTCATTCATCAAAAACCAAGGCACAACAGAATTACTCTGGAAATTCAATACTCAGCTGCAAGAACAACGATGACGCGGGACCTTCACCGGCATTCCTTTACACCTGCAATGGCCTCAACAAATCATGCATGACCTATCTAACCTTCAAATCCAAACCTCCTTATAACTCCGTTTCCACAATTTCCAGCCTCACTTCATCAAACCCGAACGAGCTAGCCAGAATCAACAACGGCGCCAATTTGCTCACAGTTTTCCCATCTGGTAAAGATGTCATTGTCCCTGTGAACTGTTCTTGTTTAACCAATGATTATTACCAAGCTGAAACCAAATATATATTGGGTCCAAACCCAACATATTTCATAGTAGCAAATGATACATTCCAGGGTTTGTCCACATGTGATTCTCTTATGCGTGCCAATCGGTATGGAGAACTTGATTTGCTTCCAGGAATGGAGTTGAACGTGCCACTCCGATGCGCTTGTCCAACATATCATCAGAAAACAAATGCCACCAAGTACTTACTCACATATTCTGTGACCTGGGGTGATAACATTTCAAATATTGCTACAAGATTCAATGTAGCAGTAGGTAATCTAATTGATGCCAATGGTTTTTCCTCACAAACTCAACCCCTTTATCCATTCACAACTGTTTTGATTCCTTTGGCAAGTGAACCAGTGAGTTTAACAACCATAGTTGCTATTGATCCACCAACACCTCTTGGTTGCAGCTTCAAAAAGTGTAAGTCAAACACAAAAGTACTCCTCATTGCATTAACCACCTCATTGCTGGGTCTGTGTGTTTTCTTGTTTGCGCTATTTCTGATTCGGTTTCTACTCAGAAAGAGATCAGCGAGGTTTGTTAAGCGATGTATGCAAGTTAAGAATAAAAAGGAGGTGTTTTCAGAAGAGATCCGTGAGGAGATAGCGATCATTGAACATCTCTCCAAAGTGTATAGCTTTGAGGAAATAAAAGAAGCAACTGACAATTTTAGTTCAAAGAATAGAATCAAAGGTTCTTTATTTCGCGGCATATTCAACAATGGCAAGGAAGTGTTGGCTGTTAAAAGAATGAGAGGAGATGCTTCTAAAGAAGTCAATTTGCTGAAAAGAATCAATCATTTCAACCTGATAAAGCTGCAAGGTTACTGTGAAAACGATGCTTGCATGTATCTTGTTTATGAATACATGCAAAATGGGTCTTTAAGAGAATGGCTTAGCAAGGATAGTTCCATTGAACACCAAAGTTGGGCAAAGAGGATACAAATTGCTTTGGATATTGCCAATGGACTTCAGTATCTTCACAACTTCACAGAACCTTGCTATGTTCACAAGGACATAAACAGTGGAAACATTCTACTGAACACAGATTTAAGGGCAAAGATAGCAAAATTTGCTCATGCTGAAGAATCAAAAAGGATGATAACTACTGGTTCTCCCACATCACATGTTGTAGGATTTATGGGCTATTTGGCTCCTGAGTATCTGGAGGCACGCGTAGTCAGTACCAAAATGGATGTCTATGCCTTTGGAGTGGTGTTGTTGGAATTGATAGCCGGCAAAGACTCTATTACCCTACAAGATGGAAGAGAAGTGATGCTTTATGAAATCATAGGAAATATCATTGGACAAGAGGATGAAGAAGAGAAGGTGAGCTTGTTCATTGATCCTTGCCTCACTGAAAGTTGTAGGAAAGCATCTGCACTTCAGCTAGTTAAACTGAGTCTAGCCTGCTTGATCAAAGAACCAGAAAGCAGACCAAACATAGCAGATGTAGTCTCTAGCTTATTGAAAATTCAGGCAAATGATATGCAACAAAGAATATCACCCGTCGTCAATAAAAACCTAAGCTTGGAAAGGTGA 1911 0.3972 MNHVVFNLFIFFTLSMLHSSKTKAQQNYSGNSILSCKNNDDAGPSPAFLYTCNGLNKSCMTYLTFKSKPPYNSVSTISSLTSSNPNELARINNGANLLTVFPSGKDVIVPVNCSCLTNDYYQAETKYILGPNPTYFIVANDTFQGLSTCDSLMRANRYGELDLLPGMELNVPLRCACPTYHQKTNATKYLLTYSVTWGDNISNIATRFNVAVGNLIDANGFSSQTQPLYPFTTVLIPLASEPVSLTTIVAIDPPTPLGCSFKKCKSNTKVLLIALTTSLLGLCVFLFALFLIRFLLRKRSARFVKRCMQVKNKKEVFSEEIREEIAIIEHLSKVYSFEEIKEATDNFSSKNRIKGSLFRGIFNNGKEVLAVKRMRGDASKEVNLLKRINHFNLIKLQGYCENDACMYLVYEYMQNGSLREWLSKDSSIEHQSWAKRIQIALDIANGLQYLHNFTEPCYVHKDINSGNILLNTDLRAKIAKFAHAEESKRMITTGSPTSHVVGFMGYLAPEYLEARVVSTKMDVYAFGVVLLELIAGKDSITLQDGREVMLYEIIGNIIGQEDEEEKVSLFIDPCLTESCRKASALQLVKLSLACLIKEPESRPNIADVVSSLLKIQANDMQQRISPVVNKNLSLER* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g5869 636 Gene3D Phosphorylase Kinase; domain 1 300 412 - -
Mal1g5869 636 SUPERFAMILY Protein kinase-like (PK-like) 337 624 IPR011009 -
Mal1g5869 636 SUPERFAMILY LysM domain 191 237 IPR036779 -
Mal1g5869 636 Pfam LysM domain 193 237 IPR018392 -
Mal1g5869 636 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 8 621 - -
Mal1g5869 636 CDD LysM 192 236 IPR018392 -
Mal1g5869 636 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 8 621 - -
Mal1g5869 636 Gene3D Transferase(Phosphotransferase) domain 1 413 632 - -
Mal1g5869 636 Gene3D LysM domain 190 237 IPR036779 -
Mal1g5869 636 ProSiteProfiles Protein kinase domain profile. 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g5869 636 ProSiteProfiles LysM domain profile. 191 236 IPR018392 -
Mal1g5869 636 Pfam Protein kinase domain 373 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g5869 Mal-Chr1 136318226 136320136 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal1g5869 Pkinase 6.7e-35 CL0016